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Author |
Hofmeester, T.R.; Cromsigt, J.P.G.M.; Odden, J.; Andrén, H.; Kindberg, J.; Linnell, J.D.C. |
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Title |
Framing pictures: A conceptual framework to identify and correct for biases in detection probability of camera traps enabling multi-species comparison |
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Journal Article |
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Year |
2019 |
Publication |
Ecology and Evolution |
Abbreviated Journal |
Ecol Evol |
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Keywords |
animal characteristics; detectability; environmental variables; mammal monitoring; reuse of data; trail camera |
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Abstract Obtaining reliable species observations is of great importance in animal ecology and wildlife conservation. An increasing number of studies use camera traps (CTs) to study wildlife communities, and an increasing effort is made to make better use and reuse of the large amounts of data that are produced. It is in these circumstances that it becomes paramount to correct for the species- and study-specific variation in imperfect detection within CTs. We reviewed the literature and used our own experience to compile a list of factors that affect CT detection of animals. We did this within a conceptual framework of six distinct scales separating out the influences of (a) animal characteristics, (b) CT specifications, (c) CT set-up protocols, and (d) environmental variables. We identified 40 factors that can potentially influence the detection of animals by CTs at these six scales. Many of these factors were related to only a few overarching parameters. Most of the animal characteristics scale with body mass and diet type, and most environmental characteristics differ with season or latitude such that remote sensing products like NDVI could be used as a proxy index to capture this variation. Factors that influence detection at the microsite and camera scales are probably the most important in determining CT detection of animals. The type of study and specific research question will determine which factors should be corrected. Corrections can be done by directly adjusting the CT metric of interest or by using covariates in a statistical framework. Our conceptual framework can be used to design better CT studies and help when analyzing CT data. Furthermore, it provides an overview of which factors should be reported in CT studies to make them repeatable, comparable, and their data reusable. This should greatly improve the possibilities for global scale analyses of (reused) CT data. |
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John Wiley & Sons, Ltd |
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2045-7758 |
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doi: 10.1002/ece3.4878 |
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Call Number |
Equine Behaviour @ team @ |
Serial |
6518 |
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Author |
Burton, A.C.; Neilson, E.; Moreira, D.; Ladle, A.; Steenweg, R.; Fisher, J.T.; Bayne, E.; Boutin, S. |
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Title |
REVIEW: Wildlife camera trapping: a review and recommendations for linking surveys to ecological processes |
Type |
Journal Article |
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Year |
2015 |
Publication |
Journal of Applied Ecology |
Abbreviated Journal |
J Appl Ecol |
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Volume |
52 |
Issue |
3 |
Pages |
675-685 |
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Keywords |
animal movement; camera trap; capture-recapture; density estimation; imperfect detection; mammal monitoring; occupancy model; relative abundance; sampling error; wildlife survey methodology |
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Abstract |
Summary Reliable assessment of animal populations is a long-standing challenge in wildlife ecology. Technological advances have led to widespread adoption of camera traps (CTs) to survey wildlife distribution, abundance and behaviour. As for any wildlife survey method, camera trapping must contend with sources of sampling error such as imperfect detection. Early applications focused on density estimation of naturally marked species, but there is growing interest in broad-scale CT surveys of unmarked populations and communities. Nevertheless, inferences based on detection indices are controversial, and the suitability of alternatives such as occupancy estimation is debatable. We reviewed 266 CT studies published between 2008 and 2013. We recorded study objectives and methodologies, evaluating the consistency of CT protocols and sampling designs, the extent to which CT surveys considered sampling error, and the linkages between analytical assumptions and species ecology. Nearly two-thirds of studies surveyed more than one species, and a majority used response variables that ignored imperfect detection (e.g. presence?absence, relative abundance). Many studies used opportunistic sampling and did not explicitly report details of sampling design and camera deployment that could affect conclusions. Most studies estimating density used capture?recapture methods on marked species, with spatially explicit methods becoming more prominent. Few studies estimated density for unmarked species, focusing instead on occupancy modelling or measures of relative abundance. While occupancy studies estimated detectability, most did not explicitly define key components of the modelling framework (e.g. a site) or discuss potential violations of model assumptions (e.g. site closure). Studies using relative abundance relied on assumptions of equal detectability, and most did not explicitly define expected relationships between measured responses and underlying ecological processes (e.g. animal abundance and movement). Synthesis and applications. The rapid adoption of camera traps represents an exciting transition in wildlife survey methodology. We remain optimistic about the technology's promise, but call for more explicit consideration of underlying processes of animal abundance, movement and detection by cameras, including more thorough reporting of methodological details and assumptions. Such transparency will facilitate efforts to evaluate and improve the reliability of camera trap surveys, ultimately leading to stronger inferences and helping to meet modern needs for effective ecological inquiry and biodiversity monitoring. |
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John Wiley & Sons, Ltd |
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0021-8901 |
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https://doi.org/10.1111/1365-2664.12432 |
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Call Number |
Equine Behaviour @ team @ |
Serial |
6703 |
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Author |
Romero, T.; Aureli, F. |
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Title |
Reciprocity of support in coatis (Nasua nasua) |
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Journal Article |
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Year |
2008 |
Publication |
Journal of Comparative Psychology |
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122 |
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1 |
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19-25 |
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Keywords |
*Animal Aggressive Behavior; *Animal Social Behavior; *Mammals; Reciprocity |
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Abstract |
Primate sociality has received much attention and its complexity has been viewed as a driving force for the evolution of cognitive abilities. Improved analytic techniques have allowed primate researchers to reveal intricate social networks based on the exchange of cooperative acts and services. Although nonprimates are known to show similar behavior (e.g., cooperative hunting, food sharing, coalitions) there seems a consensus that social life is less complex than in primates. Here the authors present the first group-level analysis of reciprocity of social interactions in a social carnivore, the ring-tailed coati (<xh:i xmlns:search=“http://marklogic.com/appservices/search” xmlns=“http://apa.org/pimain” xmlns:xsi=“http://www.w3.org/2001/XMLSchema-instance” xmlns:xh=“http://www.w3.org/1999/xhtml”>Nasua nasua</xh:i>). The authors found that support in aggressive conflicts is a common feature in coatis and that this behavior is reciprocally exchanged in a manner seemingly as complex as in primates. Given that reciprocity correlations persisted after controlling for the effect of spatial association and subunit membership, some level of scorekeeping may be involved. Further studies will be needed to confirm our findings and understand the mechanisms underlying such reciprocity, but our results contribute to the body of work that has begun to challenge primate supremacy in social complexity and cognition. (PsycINFO Database Record (c) 2012 APA, all rights reserved) |
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Romero, Teresa: Living Links, Yerkes National Primate Research Center, Emory University, 954 N. Gatewood Road, Atlanta, GA, US, 30329, mromer2@emory.edu |
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American Psychological Association |
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Us |
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1939-2087(Electronic);0735-7036(Print) |
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no |
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Equine Behaviour @ team @ 2008-01944-003 |
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5812 |
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Author |
Cameron, E.Z. |
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Title |
Facultative adjustment of mammalian sex ratios in support of the Trivers-Willard hypothesis: evidence for a mechanism |
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Journal Article |
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Year |
2004 |
Publication |
Proceedings. Biological sciences / The Royal Society |
Abbreviated Journal |
Proc Biol Sci |
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Volume |
271 |
Issue |
1549 |
Pages |
1723-1728 |
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Keywords |
Age Factors; Animals; Body Constitution; *Evolution; Female; Glucose/metabolism/physiology; Litter Size; Male; Mammals/*physiology; *Models, Biological; Reproduction/physiology; Seasons; Sex Factors; *Sex Ratio; Time Factors |
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Evolutionary theory predicts that mothers of different condition should adjust the birth sex ratio of their offspring in relation to future reproductive benefits. Published studies addressing variation in mammalian sex ratios have produced surprisingly contradictory results. Explaining the source of such variation has been a challenge for sex-ratio theory, not least because no mechanism for sex-ratio adjustment is known. I conducted a meta-analysis of previous mammalian sex-ratio studies to determine if there are any overall patterns in sex-ratio variation. The contradictory nature of previous results was confirmed. However, studies that investigated indices of condition around conception show almost unanimous support for the prediction that mothers in good condition bias their litters towards sons. Recent research on the role of glucose in reproductive functioning have shown that excess glucose favours the development of male blastocysts, providing a potential mechanism for sex-ratio variation in relation to maternal condition around conception. Furthermore, many of the conflicting results from studies on sex-ratio adjustment would be explained if glucose levels in utero during early cell division contributed to the determination of offspring sex ratios. |
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Mammal Research Institute, Department of Zoology and Entomology, University of Pretoria, Pretoria 0002, South Africa. ezcameron@zoology.up.ac.za |
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English |
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0962-8452 |
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PMID:15306293 |
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no |
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refbase @ user @ |
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413 |
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Linklater, W.L.; Cameron, E.Z.; Stafford, K.J.; Veltman, C.J. |
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Social and spatial structure and range use by Kaimanawa wild horses (Equus caballus: Equidae) |
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Journal Article |
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2000 |
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New Zealand Journal of Ecology |
Abbreviated Journal |
New Zealand J. Ecol. |
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24 |
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2 |
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139-152 |
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Bachelor male; Band; Density; Habitat use; Home range; Management proposals; Micro-climate; Vegetation monitoring; habitat use; home range; mammal; social structure; spatial distribution; New Zealand; Equus caballus |
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We measured horse density, social structure, habitat use, home ranges and altitudinal micro-climates in the south-western Kaimanawa ranges east of Waiouru, New Zealand. Horse density in the Auahitotara ecological sector averaged 3.6 horses.km-2 and ranged from 0.9 to 5.2 horses.km-2 within different zones. The population's social structure was like that of other feral horse populations with an even adult sex ratio, year round breeding groups (bands) with stable adult membership consisting of 1 to 11 mares, 1 to 4 stallions, and their predispersal offspring, and bachelor groups with unstable membership. Bands and bachelor males were loyal to undefended home ranges with central core use areas. Band home range sizes varied positively with adult band size. Home ranges overlapped entirely with other home ranges. Horses were more likely to occupy north facing aspects, short tussock vegetation and flush zones and avoid high altitudes, southern aspects, steeper slopes, bare ground and forest remnants. Horses were more likely to be on north facing aspects, steeper slopes, in exotic and red tussock grasslands and flush zones during winter and at lower altitudes and on gentler slopes in spring and summer. Seasonal shifts by bands to river basin and stream valley floors in spring and higher altitudes in autumn and winter are attributed to the beginning of foaling and mating in spring and formation of frost inversion layers in winter. Given horse habitat selectivity and the presence of other ungulate herbivores, results from present exclosures are likely to exaggerate the size of horse impacts on range vegetation. Proposals to manage the population by relocation and confinement are likely to modify current social structure and range use behaviour and may lead to the need for more intensive management in the longer term. |
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Address |
Ecology Group, Institute of Natural Resources, Massey University, Private Bag 11-222, Palmerston North, New Zealand |
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01106465 (Issn) |
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Cited By (since 1996): 12; Export Date: 21 April 2007; Source: Scopus; Language of Original Document: English; Correspondence Address: Linklater, W.L.; Ecology Group; Institute of Natural Resources; Massey University; Private Bag 11-222 Palmerston North, New Zealand; email: wlinklater@hotmail.com |
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no |
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refbase @ user @ |
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793 |
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Author |
Wilson, D.A.; Stevenson, R.J. |
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Title |
The fundamental role of memory in olfactory perception |
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Journal Article |
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Year |
2003 |
Publication |
Trends in Neurosciences |
Abbreviated Journal |
Trends. Neurosci. |
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26 |
Issue |
5 |
Pages |
243-247 |
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Keywords |
olfactory perception mammals |
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Current emphasis on odorant physiochemical features as the basis for perception largely ignores the synthetic and experience-dependent nature of olfaction. Olfaction is synthetic, as mammals have only limited ability to identify elements within even simple odor mixtures. Furthermore, olfaction is experience-bound, as exposure alone can significantly affect the extent to which stimuli can be discriminated. We propose that early analytical processing of odors is inaccessible at the behavioral level and that all odors are initially encoded as `objects' in the piriform cortex. Moreover, we suggest that odor perception is wholly dependent on the integrity of this memory system and that its loss severely impairs normal perception. |
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refbase @ user @ |
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795 |
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Author |
Keverne, E.B. |
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Title |
Olfactory learning |
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Journal Article |
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Year |
1995 |
Publication |
Current Opinion in Neurobiology |
Abbreviated Journal |
Curr. Opin. Neurobiol. |
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5 |
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4 |
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482-488 |
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olfactory perception mammals |
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Unravelling the mechanisms of learning and memory can, and should, be tackled at many levels. Discovery of the huge family of odourant receptor genes provided olfaction with `molecular' respectability similar to that afforded to the visual system. Consequently, molecular studies have dominated the olfactory literature this past year, even to the point of providing a molecular basis of olfactory perception. Needless to say, the molecular approach favours a `hard-wired' system; however, other results suggest that flexibility in the olfactory system provides for certain adaptations that are crucial to the biological needs of mammals. |
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refbase @ user @ |
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798 |
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Thackeray, J.F. |
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Title |
Zebras from wonderwerk cave, northern Cape province, South Africa: attempts to distinguish Equus burchelli and E. quagga |
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Journal Article |
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Year |
1988 |
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South African journal of science |
Abbreviated Journal |
Suid- Afrikaanse Tydsskrif vir Wetenskap |
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84 |
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99-101 |
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Cape Province; Teeth; Statistical analysis; Equidae; Hippomorpha; South Africa; Southern Africa; Perissodactyla; Mammalia; Vertebrata |
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0038-2353 |
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from Professor Hans Klingels Equine Reference List |
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yes |
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1644 |
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Author |
Novacek, M.J. |
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Title |
Mammalian phylogeny: shaking the tree |
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Journal Article |
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1992 |
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Nature |
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Nature |
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356 |
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6365 |
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121-125 |
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Animals; Evolution; Fossils; Mammals/classification/*genetics; *Phylogeny |
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Recent palaeontological discoveries and the correspondence between molecular and morphological results provide fresh insight on the deep structure of mammalian phylogeny. This new wave of research, however, has yet to resolve some important issues. |
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American Museum of Natural History, New York 10024 |
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0028-0836 |
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PMID:1545862 |
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Equine Behaviour @ team @ |
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3546 |
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Yokoyama, S.; Radlwimmer, F.B. |
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The molecular genetics of red and green color vision in mammals |
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Journal Article |
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1999 |
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Genetics |
Abbreviated Journal |
Genetics |
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153 |
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2 |
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919-932 |
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Amino Acid Sequence; Animals; Base Sequence; COS Cells; Cats; Color Perception/*genetics; DNA Primers; Deer; Dolphins; *Evolution, Molecular; Goats; Guinea Pigs; Horses; Humans; Mammals/*genetics/physiology; Mice; Molecular Sequence Data; Opsin/biosynthesis/chemistry/*genetics; *Phylogeny; Rabbits; Rats; Recombinant Proteins/biosynthesis; Reverse Transcriptase Polymerase Chain Reaction; Sciuridae; Sequence Alignment; Sequence Homology, Amino Acid; Transfection |
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To elucidate the molecular mechanisms of red-green color vision in mammals, we have cloned and sequenced the red and green opsin cDNAs of cat (Felis catus), horse (Equus caballus), gray squirrel (Sciurus carolinensis), white-tailed deer (Odocoileus virginianus), and guinea pig (Cavia porcellus). These opsins were expressed in COS1 cells and reconstituted with 11-cis-retinal. The purified visual pigments of the cat, horse, squirrel, deer, and guinea pig have lambdamax values at 553, 545, 532, 531, and 516 nm, respectively, which are precise to within +/-1 nm. We also regenerated the “true” red pigment of goldfish (Carassius auratus), which has a lambdamax value at 559 +/- 4 nm. Multiple linear regression analyses show that S180A, H197Y, Y277F, T285A, and A308S shift the lambdamax values of the red and green pigments in mammals toward blue by 7, 28, 7, 15, and 16 nm, respectively, and the reverse amino acid changes toward red by the same extents. The additive effects of these amino acid changes fully explain the red-green color vision in a wide range of mammalian species, goldfish, American chameleon (Anolis carolinensis), and pigeon (Columba livia). |
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Department of Biology, Syracuse University, Syracuse, New York 13244, USA. syokoyam@mailbox.syr.edu |
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0016-6731 |
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PMID:10511567 |
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Equine Behaviour @ team @ |
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4063 |
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