Abstract: The Y chromosome directly reflects male genealogies, but the extremely low Y chromosome sequence diversity in horses has prevented the reconstruction of stallion genealogies [1, 2]. Here, we resolve the first Y chromosome genealogy of modern horses by screening 1.46 Mb of the male-specific region of the Y chromosome (MSY) in 52 horses from 21 breeds. Based on highly accurate pedigree data, we estimated the de novo mutation rate of the horse MSY and showed that various modern horse Y chromosome lineages split much later than the domestication of the species. Apart from few private northern European haplotypes, all modern horse breeds clustered together in a roughly 700-year-old haplogroup that was transmitted to Europe by the import of Oriental stallions. The Oriental horse group consisted of two major subclades: the Original Arabian lineage and the Turkoman horse lineage. We show that the English Thoroughbred MSY was derived from the Turkoman lineage and that English Thoroughbred sires are largely responsible for the predominance of this haplotype in modern horses.

Abstract: A total of 208 sows and 288 gilts (PIC Line C29) were used to determine the influence of feeding frequency (2 versus 6 times/d, floor fed) on performance and welfare measurements on a commercial sow farm. Treatments consisted of feeding similar amounts of feed to each sow (2.5 kg) or gilt (2.05 kg) over 2 (0700 and 1530 h) or 6 times daily (0700, 0730, 0800, 1530, 1600, and 1630). There were 8 sows or 12 gilts in each pen. Gilts and sows were moved to pens 1 to 4 d after breeding. In sows, there were no differences (P > 0.10) in ADG, backfat change, or variation in BW. There was a trend (P < 0.08) for sows fed twice a daily to farrow more total pigs born, but number born alive or other reproductive performance traits were not different (P > 0.10) among treatments. Sows fed 6 times per d had increased vocalization during the morning (P < 0.07) and afternoon (P < 0.01) feeding periods compared with sows fed twice daily. Sows fed twice daily had more skin (P < 0.01) and vulva (P < 0.04) lesions as well as a small increase in feet and leg (P < 0.01) and hoof (P < 0.02) problems. In this commercial facility, the standard management protocol required moving gilts to a different gestation facility on d 42. On d 42, 2 pens of gilts with similar breeding dates and treatment were combined and moved to another facility with larger pens until farrowing. Gilts fed 6 times daily had a tendency for greater ADG (P < 0.07) from d 0 to 42, and a tendency for greater (P < 0.09) backfat on d 42. After movement to the larger groups from d 42 to farrowing, ADG was similar (P > 0.10) for gilts fed 2 or 6 times daily. Gilts fed twice daily had lower BW variation at d 42 (P < 0.04) and tended to at farrowing (P < 0.10). In gilts, there were no differences (P > 0.10) for reproductive performance, skin and vulva lesions, and feet, leg scores. In conclusion, there were few growth, farrowing, or aggression differences among gilts fed either 2 or 6 times daily. This suggests that either feeding method is suitable for group housed gilts. Among sows, feeding frequency resulted in few growth or farrowing performance differences. Feeding 6 times daily resulted in a small but significant reduction in skin and vulva lesions and structural problem scores while increasing vocalization. Increasing the feeding frequency from 2 to 6 times daily does not appear to have a negative or positive impact on performance or welfare of group housed gilts and sows.

Abstract: Two studies were conducted to determine the relationship of feeding behavior to the phenotypic expression of feed efficiency. In Exp. 1, a feedlot diet containing roughage was fed (traditional). In Exp. 2, a no-roughage diet was fed. Residual feed intake (RFI), a measure of feed efficiency, was calculated for both studies. In Exp. 1, 6 feed efficient (low RFI) steers and 6 feed inefficient steers (high RFI) were selected from a contemporary group of 80 steers, and feeding behaviors were analyzed. In Exp. 2, 9 feed efficient and 8 feed inefficient steers were selected from a contemporary group of 40 steers. There were no differences (P > 0.13) in initial or final BW or ADG between efficient and inefficient groups in either Exp. 1 or 2. In Exp. 1 DMI and average eating bouts daily differed (P < 0.001) with efficient steers consuming less feed and eating fewer times per day. In Exp. 2, efficient steers consumed less (P < 0.001) feed, and average eating bouts daily tended (P = 0.07) to be fewer in efficient animals. Limited differences were noted in feeding behavior between groups, with inefficient steers from both studies having a more variable eating pattern throughout the day. The average daily eating rate did not differ (P > 0.20) between groups in either experiment. The average number of days comprising a feeding pattern for both feed efficiency groups in Exp. 1 and 2 was found to be 2 to 3 d and multiples of 2 to 3 d. In Exp. 1 the feed intake pattern of efficient and inefficient steers changed once they reached a BW of approximately 391 kg and 381 kg, respectively. This occurred near d 47 for the efficient steers and near d 32 for inefficient steers. In Exp. 2 the feed intake pattern of both efficient and inefficient steers changed once they reached a BW of approximately 399 kg, which occurred on d 31 for the efficient steers and on d 33 for the inefficient steers. From the measured variables there were no differences in growth and limited differences noted in feeding behavior between feed efficient and feed inefficient groups. The results of the trials suggest increased variability of feed intake throughout the day for feed inefficient animals.

Abstract: The bedding preferences of ponies were determined using video recordings of nighttime (1900 to 0700) behavior of individually housed ponies. The ponies' behavior each minute was recorded to determine time budgets. In Exp. I, preference for bedding was determined using three mares, three stallions and two geldings given access to bedded and unbedded areas in a box stall. The ponies spent more time (66%) on the bedded area and were never observed lying on the unbedded areas. In Exp. II, three mares and six stallions were given access to a box stall, one side of which was bedded with wood shavings and the other with straw. Although some individual animals preferred one bedding over the other, neither form of bedding was preferred consistently. Time budgets in Exp. II were similar on both bedding materials. The ponies spent 12% of their nighttime lying, 2% walking, 35% eating and 50% standing inactively. Some ponies had a relatively strong preference for bedding, but the type of bedding preferred varied with the individual animal. Some individual ponies had no clear preference, but instead had a side or position preference

Abstract: Reliable physiological markers for performance evaluation in sport horses are missing. To determine the diagnostic value of plasma ACTH and cortisol measurements in the warmblood horse, 10 initially 3-yr-old geldings of the Hannovarian breed were either exposed to a training schedule or served as controls. During experimental Phase 1, horses were group-housed, and half of the horses were trained for 20 wk on a high-speed treadmill. During Phase 2, groups were switched and one group was trained for 10 wk as during Phase 1, whereas the control group was confined to boxes. During Phase 3 horses were initially schooled for riding. Thereafter, all horses were regularly schooled for dressage and jumping, and half of the horses received an additional endurance training for 24 wk. During all phases horses were exposed at regular intervals to various standardized treadmill exercise tests. During and after the tests frequent blood samples were taken from an indwelling jugular catheter for determination of ACTH and cortisol. Treadmill exercise increased both hormones. Maximum ACTH concentrations were recorded at the end of exercise, and maximum cortisol levels were recorded 20 to 30 min later. Except for one test there were no differences in ACTH levels between trained horses and controls. There was no significant effect of training on the cortisol response (net increase) to treadmill exercise in any of the tests during Phase 1. During Phase 2 higher cortisol responses were recorded in controls than in trained horses (P < .05) after 10 wk of training (controls confined to boxes). During Phase 3 plasma cortisol responses were also higher in controls than in trained horses (P < .05 after 6, 18, and 24, P < or = .07 after 12 wk of training) when the inclination of the treadmill was 5%, but not at 3%. There was no overlap in net cortisol responses at 30 min between trained and untrained horses. An ACTH application after 24 wk of training resulted in higher cortisol responses in controls than in trained horses (P < or = .05), without any overlap between the groups at 30 min after ACTH. Plasma cortisol responses to either treadmill exercise or ACTH injection may be a reliable physiological marker for performance evaluation. Prerequisites are sufficient differences in training status and sufficient intensity of exercise test conditions.