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Author Gulotta, M.; Rogatsky, E.; Callender, R.H.; Dyer, R.B.
Title Primary folding dynamics of sperm whale apomyoglobin: core formation Type Journal Article
Year 2003 Publication Biophysical Journal Abbreviated Journal (up) Biophys J
Volume 84 Issue 3 Pages 1909-1918
Keywords Animals; Apoproteins/*chemistry; Crystallography/*methods; Horses; Myocardium/chemistry; Myoglobin/*chemistry; Protein Conformation; *Protein Folding; Species Specificity; Structure-Activity Relationship; Temperature; Whales
Abstract The structure, thermodynamics, and kinetics of heat-induced unfolding of sperm whale apomyoglobin core formation have been studied. The most rudimentary core is formed at pH(*) 3.0 and up to 60 mM NaCl. Steady state for ultraviolet circular dichroism and fluorescence melting studies indicate that the core in this acid-destabilized state consists of a heterogeneous composition of structures of approximately 26 residues, two-thirds of the number involved for horse heart apomyoglobin under these conditions. Fluorescence temperature-jump relaxation studies show that there is only one process involved in Trp burial. This occurs in 20 micro s for a 7 degrees jump to 52 degrees C, which is close to the limits placed by diffusion on folding reactions. However, infrared temperature jump studies monitoring native helix burial are biexponential with times of 5 micro s and 56 micro s for a similar temperature jump. Both fluorescence and infrared fast phases are energetically favorable but the slow infrared absorbance phase is highly temperature-dependent, indicating a substantial enthalpic barrier for this process. The kinetics are best understood by a multiple-pathway kinetics model. The rapid phases likely represent direct burial of one or both of the Trp residues and parts of the G- and H-helices. We attribute the slow phase to burial and subsequent rearrangement of a misformed core or to a collapse having a high energy barrier wherein both Trps are solvent-exposed.
Address Department of Biochemistry, Albert Einstein College of Medicine, Bronx, New York 10461, USA. gulotta@aecom.yu.edu
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0006-3495 ISBN Medium
Area Expedition Conference
Notes PMID:12609893 Approved no
Call Number Equine Behaviour @ team @ Serial 3783
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Author Nicol, C.J.; Potzsch, C.; Lewis, K.; Green, L.E.
Title Matched concurrent case-control study of risk factors for feather pecking in hens on free-range commercial farms in the UK Type Journal Article
Year 2003 Publication British poultry science Abbreviated Journal (up) Br Poult Sci
Volume 44 Issue 4 Pages 515-523
Keywords *Aggression; Analysis of Variance; Animal Husbandry/methods; Animals; Case-Control Studies; Chickens/*physiology; Feathers; Female; Multivariate Analysis; Odds Ratio; Regression Analysis; Species Specificity
Abstract 1. The aim of the study was to compare the management and husbandry of free-range flocks in the UK where feather pecking was either present (case) or absent (control). 2. One hundred flocks were enrolled into a concurrent case-control study: 50 where birds had recently started feather pecking, and 50 matched control flocks where birds of the same age had not started feather pecking. 3. Information was obtained from a detailed interview with the flock manager, and by direct inspection of the flock, house and range. 4. Initial univariate analyses revealed that case flocks were more likely to comprise ISA Brown than Lohmann, were more likely to be restricted from litter areas to prevent floor eggs, and were less likely to use the outside range. 5. Cluster analysis indicated that feather pecking was not associated with any particular husbandry system. 6. The only influential risk factor significant in the multivariable conditional logistic regression analysis was use of the outdoor range. The risk of feather pecking was reduced 9-fold in flocks where more than 20% of birds used the range on sunny days (odds ratio = 0.12). Use of the range was positively associated with the presence of trees and/or hedges on the range.
Address Department of Clinical Veterinary Science, University of Bristol, England. c.j.nicol@bris.ac.uk
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0007-1668 ISBN Medium
Area Expedition Conference
Notes PMID:14584840 Approved no
Call Number refbase @ user @ Serial 79
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Author Albentosa, M.J.; Kjaer, J.B.; Nicol, C.J.
Title Strain and age differences in behaviour, fear response and pecking tendency in laying hens Type Journal Article
Year 2003 Publication British poultry science Abbreviated Journal (up) Br Poult Sci
Volume 44 Issue 3 Pages 333-344
Keywords Age Factors; Aggression/*physiology; Animal Husbandry; Animals; *Behavior, Animal; Breeding; Chickens/genetics/*physiology; Fear/*physiology; Feathers/*injuries; Female; Housing, Animal; Population Density; Social Behavior
Abstract 1. Behaviours associated with a high or low tendency to feather peck could be used as predictors of feather pecking behaviour in selective breeding programmes. This study investigated how strain and age at testing influenced responses in behavioural tests. 2. Four layer-type strains (ISA Brown, Columbian Blacktail, Ixworth and a high feather pecking (HP) and a low feather pecking (LP) line of White Leghorn) were reared in 6 same-strain/line pens of 8 birds from one day old. Birds in half the pens were given an open field test, a novel object test and a test with loose feather bundles between 4 and 12 weeks of age and a tonic immobility (TI) test at 13 weeks of age. All pens were tested with fixed feather bundles at 26 weeks, and undisturbed behaviour in the home pens was videoed at 1 and 27 weeks of age. Daily records of plumage damage were used as an indicator of feather pecking activity in the home pens. 3. Strain did not influence novel object test, open field test or loose feather test behaviour, although age effects in all three tests indicated a reduction in fearfulness and/or an increase in exploratory behaviour with increasing age. 4. White Leghorns showed longer TI durations than the other strains but less pecking at fixed feather bundles than ISA Browns and Columbian Blacktails. 5. There were few associations between behaviour in the 5 different tests, indicating that birds did not have overall behavioural traits that were consistent across different contexts. This suggests hens cannot easily be categorised into different behavioural 'types', based on their test responses and casts doubt on the usefulness of tests as predictors of feather pecking.
Address Centre for Behavioural Biology, Division of Farm Animal Science, University of Bristol, Langford, Bristol, England. MAlbentosa@lincoln.ac.uk
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0007-1668 ISBN Medium
Area Expedition Conference
Notes PMID:13677322 Approved no
Call Number refbase @ user @ Serial 80
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Author Freire, R.; Wilkins, L.J.; Short, F.; Nicol, C.J.
Title Behaviour and welfare of individual laying hens in a non-cage system Type Journal Article
Year 2003 Publication British poultry science Abbreviated Journal (up) Br Poult Sci
Volume 44 Issue 1 Pages 22-29
Keywords *Animal Welfare; Animals; *Behavior, Animal; *Chickens; Female; Housing, Animal/*standards; Oviposition
Abstract 1. A leg band containing a transponder was fitted to 80 birds in a perchery containing 1,000 birds. 2. The transponder emitted a unique identification number when a bird walked on one of 8 flat antennae on the floor. The recording apparatus was used to measure the amount of time that each of the tagged birds spent on the slatted and littered areas in a 6-week period. 3. Some birds spent long periods of time on the slats, possibly as a means of avoiding repeated attacks. Duration on the slats was greatest in birds with the worst (as opposed to better) feather scores of the head, back and tail regions. 4. Birds that spent long periods on the slats were lighter than other birds at both 39 weeks of age and 72 weeks of age and had greater back, head and tail feather damage, consistent with these birds being victims of pecking. 5. Tagged birds received a social avoidance test outside the perchery at 39 weeks of age, which suggested that birds retreated to the slats in response to pecks rather than just to close proximity to other birds. 6. The failure to find that duration on the slats was related to anatomical indicators of stress (liver, spleen and bursa of Fabricius) suggests that retreating to the slats following pecking attenuates physiological stress responses. 7. We conclude that the provision of areas where birds in a large group can avoid pecking may improve the welfare of a minority of victimised birds.
Address Department of Clinical Veterinary Science, University of Bristol, Langford, Bristol, England. rkfreire@hotmail.com
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0007-1668 ISBN Medium
Area Expedition Conference
Notes PMID:12737221 Approved no
Call Number refbase @ user @ Serial 82
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Author Shettleworth, S.J.
Title Memory and hippocampal specialization in food-storing birds: challenges for research on comparative cognition Type Journal Article
Year 2003 Publication Brain, behavior and evolution Abbreviated Journal (up) Brain Behav Evol
Volume 62 Issue 2 Pages 108-116
Keywords Animals; Birds/*physiology; Cognition/*physiology; Color Perception/physiology; Feeding Behavior/*physiology; Hippocampus/*physiology; Memory/*physiology; Species Specificity
Abstract The three-way association among food-storing behavior, spatial memory, and hippocampal enlargement in some species of birds is widely cited as an example of a new 'cognitive ecology' or 'neuroecology.' Whether this relationship is as strong as it first appears and whether it might be evidence for an adaptive specialization of memory and hippocampus in food-storers have recently been the subject of some controversy [Bolhuis and Macphail, 2001; Macphail and Bolhuis, 2001]. These critiques are based on misconceptions about the nature of adaptive specializations in cognition, misconceptions about the uniformity of results to be expected from applying the comparative method to data from a wide range of species, and a narrow view of what kinds of cognitive adaptations are theoretically interesting. New analyses of why food-storers (black-capped chickadees, Poecile Atricapilla) respond preferentially to spatial over color cues when both are relevant in a memory task show that this reflects a relative superiority of spatial memory as compared to memory for color rather than exceptional spatial attention or spatial discrimination ability. New studies of chickadees from more or less harsh winter climates also support the adaptive specialization hypothesis and suggest that within-species comparisons may be especially valuable for unraveling details of the relationships among ecology, memory, and brain in food-storing species.
Address Department of Psychology, University of Toronto, Toronto, Ont., M5S 3G3, Canada. shettle@psych.utoronto.ca
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0006-8977 ISBN Medium
Area Expedition Conference
Notes PMID:12937349 Approved no
Call Number refbase @ user @ Serial 367
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Author Singh,M.; Singh,M.; Sharma, A. K.; Krishna B. A.
Title Methodological considerations in measurement of dominance in primates Type Journal Article
Year 2003 Publication CURRENT SCIENCE Abbreviated Journal (up) CURRENT SCIENCE
Volume 84 Issue 5 Pages 709-713
Keywords
Abstract The strength of dominance hierarchy in a group of

animals needs to be quantitatively measured since it

influences many other aspects of social interactions.

This article discusses three attempts made by previous

researchers to measure the strength of hierarchy. We

propose a method which attempts to rectify the lacunae

in the previous attempts. Data are used from a

group of Japanese macaques housed in a colony. A

method to calculate strength of hierarchy has been

illustrated and a procedure has been suggested to

normalize the dominance scores in order to place the

ranks of individuals on an interval scale.
Address
Corporate Author Thesis
Publisher Biopsychology Laboratory, Department of Psychology, University of Mysore, Mysore 570 006, India Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes Approved no
Call Number Equine Behaviour @ team @ Serial 2860
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Author Bowling, A.T.; Zimmermann, W.; Ryder, O.; Penado, C.; Peto, S.; Chemnick, L.; Yasinetskaya, N.; Zharkikh, T.
Title Genetic variation in Przewalski’s horses, with special focus on the last wild caught mare, 231 Orlitza III Type Journal Article
Year 2003 Publication Cytogenetic and Genome Research Abbreviated Journal (up) Cytogenet Genome Res
Volume 102 Issue 1-4 Pages 226-234
Keywords
Abstract
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1424-8581 ISBN Medium
Area Expedition Conference
Notes Approved no
Call Number Equine Behaviour @ team @ Serial 5045
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Author Broucek, J.; Ksac, P.; Uhrincat, M.
Title The effect of sire line on learning and locomotor behaviour of heifers Type Journal Article
Year 2003 Publication Czech Journal of Animal Science Abbreviated Journal (up) Czech J. Anim. Sci
Volume 48 Issue Pages 387-394
Keywords heifers; sire; maze; open-field test; repeatability; learning; locomotor behaviour relationship
Abstract ABSTRACT: e aim of this study was to test the effect of sire line on maze learning ability and locomotor behaviour

in open-field tests of heifers, consistency over the time of grid crossing and relationship between the time of traversing the maze and grid crossings in open-field tests, respectively. We analysed the results of ethological tests for 54 Holstein heifers that descended from 7 sires. Maze behaviour was observed at the age of 15 weeks, an open-field test was applied at two age periods, 16 weeks and 18 months. We found out highly significant differences in the time of traversing the maze between heifers of different sire origin (P < 0.01). &#57426;e number of grid crossings over the five minutes of the open-field test did not differ between the daughters of the age of 16 weeks and 18 months. Repeatability between the number of grid crossings at the age of 16 weeks and 18 months was proved by significant correlation (r = 0.2713*). On the contrary, significant relationships between the times of traversing the maze and locomotor behaviour in the open-field test (r =-0.3739*) were found only when the sequence of observations followed

after a week pause (age of 15 and 16 weeks).
Address
Corporate Author Thesis
Publisher Place of Publication Editor
Language Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN ISBN Medium
Area Expedition Conference
Notes Approved no
Call Number Equine Behaviour @ team @ Serial 4322
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Author Nelson, E.E.; Shelton, S.E.; Kalin, N.H.
Title Individual differences in the responses of naive rhesus monkeys to snakes Type Journal Article
Year 2003 Publication Emotion (Washington, D.C.) Abbreviated Journal (up) Emotion
Volume 3 Issue 1 Pages 3-11
Keywords Animals; *Arousal; Attention; Escape Reaction; *Fear; Female; Habituation, Psychophysiologic; *Individuality; Macaca mulatta/*psychology; Male; Phobic Disorders/psychology; *Snakes
Abstract The authors demonstrated individual differences in inhibited behavior and withdrawal responses of laboratory-born rhesus monkeys when initially exposed to a snake. Most monkeys displayed a small significant increase in their behavioral inhibition in the presence of a snake. A few monkeys had marked responses, and some actively withdrew. Although the responses of the most extreme laboratory-born monkeys were comparable to feral-born monkeys, the responses of the laboratory-born monkeys rapidly habituated. The individual differences in the responses of naive monkeys likely reflect a continuum from orienting to wariness to fear. A neurobiological model is presented that addresses potential mechanisms underlying these individual differences, their relation to fear, and how they may predispose to phobia development.
Address Department of Psychiatry, University of Wisconsin-Madison, 53719-1176, USA
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1528-3542 ISBN Medium
Area Expedition Conference
Notes PMID:12899313 Approved no
Call Number Equine Behaviour @ team @ Serial 4174
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Author Visser, E.K.; Van Reenen, C.G.; Rundgren, M.; Zetterqvist, M.; Morgan, K.; Blokhuis, H.J.
Title Responses of horses in behavioural tests correlate with temperament assessed by riders Type Journal Article
Year 2003 Publication Equine Veterinary Journal Abbreviated Journal (up) Equine Vet J
Volume 35 Issue 2 Pages 176-183
Keywords Adult; Animals; *Behavior, Animal/physiology; Data Interpretation, Statistical; Female; *Handling (Psychology); Heart Rate/*physiology; Horses/physiology/*psychology; Humans; Male; Personality; Temperament/*physiology
Abstract REASONS FOR PERFORMING STUDY: Behavioural tests as well as observers' ratings have been used to study horses' temperament. However, the relationship between the ratings and the responses in behavioural tests has not yet been studied in detail. OBJECTIVES: The aim of the present study was to examine this relationship between ratings and responses. METHODS: Eighteen mature Swedish Warmblood horses were subjected to 2 behavioural tests, one relating to novelty (novel object test) and one to handling (handling test). Subsequently, 16 of these horses were ridden by 16 equally experienced students, having no former experience with the horses. Immediately after each ride, the students scored the horse for 10 temperamental traits using a line rating method. RESULTS: It was shown that for each temperamental trait all 16 riders agreed on the ranking of the horses (0.212<W<0.505, P < 0.001). CONCLUSIONS: Correlations between behavioural and heart rate variables in the behavioural tests revealed that horses with a high level of locomotion or much restlessness behaviour exhibited high mean heart rate and low heart rate variability. In particular, heart rate variables in the behavioural tests were found to correlate with riders' rating scores. Furthermore, the underlying components of the handling test, retrieved with a principal component analysis (PCA) correlated with riders' rating scores while the underlying components of the novel object test did not. POTENTIAL CLINICAL RELEVANCE: It is concluded that it is possible for a large panel of assessors to agree upon a horse's temperament and that objective measures from behavioural tests correlate significantly with temperamental traits assessed by a panel of assessors.
Address Department of Equine Sciences, Faculty of Veterinary Medicine, Utrecht University, PO Box 80.163, NL-3508 TD Utrecht, The Netherlands
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0425-1644 ISBN Medium
Area Expedition Conference
Notes PMID:12638795 Approved no
Call Number Serial 1906
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