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Author |
Jansen, T.; Forster, P.; Levine, M.A.; Oelke, H.; Hurles, M.; Renfrew, C.; Weber, J.; Olek, K. |
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Title |
Mitochondrial DNA and the origins of the domestic horse |
Type |
Journal Article |
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Year |
2002 |
Publication |
Proceedings of the National Academy of Sciences of the United States of America |
Abbreviated Journal |
Proc. Natl. Acad. Sci. U.S.A. |
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Volume |
99 |
Issue |
16 |
Pages  |
10905-10910 |
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Keywords |
Animals; Animals, Domestic/classification/*genetics; Base Sequence; DNA, Complementary; *DNA, Mitochondrial; *Evolution, Molecular; Horses/classification/*genetics; Molecular Sequence Data; Phylogeny |
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Abstract |
The place and date of the domestication of the horse has long been a matter for debate among archaeologists. To determine whether horses were domesticated from one or several ancestral horse populations, we sequenced the mitochondrial D-loop for 318 horses from 25 oriental and European breeds, including American mustangs. Adding these sequences to previously published data, the total comes to 652, the largest currently available database. From these sequences, a phylogenetic network was constructed that showed that most of the 93 different mitochondrial (mt)DNA types grouped into 17 distinct phylogenetic clusters. Several of the clusters correspond to breeds and/or geographic areas, notably cluster A2, which is specific to Przewalski's horses, cluster C1, which is distinctive for northern European ponies, and cluster D1, which is well represented in Iberian and northwest African breeds. A consideration of the horse mtDNA mutation rate together with the archaeological timeframe for domestication requires at least 77 successfully breeding mares recruited from the wild. The extensive genetic diversity of these 77 ancestral mares leads us to conclude that several distinct horse populations were involved in the domestication of the horse. |
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Biopsytec Analytik GmbH, Marie-Curie-Strasse 1, 53359 Rheinbach, Germany. jansen@biopsytec.com |
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0027-8424 |
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PMID:12130666 |
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Call Number |
refbase @ user @ |
Serial |
772 |
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Author |
A. Lanata; A. Guidi; G. Valenza; P. Baragli; E. P. Scilingo |
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Title |
Quantitative heartbeat coupling measures in human-horse interaction |
Type |
Conference Article |
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Year |
2016 |
Publication |
2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) |
Abbreviated Journal |
2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (E |
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Pages |
2696-2699 |
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Keywords |
electrocardiography; medical signal processing; signal classification; time series; Dtw; Hrv; Mpc; Msc; complex biological systems; dynamic time warping; grooming; heart rate variability time series; heartbeat dynamics; human-horse dynamic interaction; magnitude squared coherence; magnitude-phase coupling; mean phase coherence; nearest mean classifier; quantitative heartbeat coupling; real human-animal interaction; time duration; visual-olfactory interaction; Coherence; Couplings; Electrocardiography; Heart rate variability; Horses; Protocols; Time series analysis |
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Abstract— We present a study focused on a quantitative estimation of a human-horse dynamic interaction. A set of measures based on magnitude and phase coupling between heartbeat dynamics of both humans and horses in three different conditions is reported: no interaction, visual/olfactory interaction and grooming. Specifically, Magnitude Squared Coherence (MSC), Mean Phase Coherence (MPC) and Dynamic Time Warping (DTW) have been used as estimators of the amount of coupling between human and horse through the analysis of their heart rate variability (HRV) time series in a group of eleven human subjects, and one horse. The rationale behind this study is that the interaction of two complex biological systems go towards a coupling process whose dynamical evolution is modulated by the kind and time duration of the interaction itself. We achieved a congruent and consistent
statistical significant difference for all of the three indices. Moreover, a Nearest Mean Classifier was able to recognize the three classes of interaction with an accuracy greater than 70%. Although preliminary, these encouraging results allow a discrimination of three distinct phases in a real human-animal interaction opening to the characterization of the empirically proven relationship between human and horse. |
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2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (E |
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1557-170x |
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Equine Behaviour @ team @ |
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6175 |
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Author |
Sebastiani, F.; Meiswinkel, R.; Gomulski, L.M.; Guglielmino, C.R.; Mellor, P.S.; Malacrida, A.R.; Gasperi, G. |
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Title |
Molecular differentiation of the Old World Culicoides imicola species complex (Diptera, Ceratopogonidae), inferred using random amplified polymorphic DNA markers |
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Journal Article |
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Year |
2001 |
Publication |
Molecular Ecology |
Abbreviated Journal |
Mol Ecol |
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Volume |
10 |
Issue |
7 |
Pages |
1773-1786 |
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Keywords |
Africa; Animals; Ceratopogonidae/*classification/*genetics; Ecology; Evolution, Molecular; Female; *Genetic Markers; Madagascar; Phylogeny; *Polymorphism, Genetic; *Random Amplified Polymorphic DNA Technique; Variation (Genetics) |
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Abstract |
Samples of seven of the 10 morphological species of midges of the Culicoides imicola complex were considered. The importance of this species complex is connected to its vectorial capacity for African horse sickness virus (AHSV) and bluetongue virus (BTV). Consequently, the risk of transmission may vary dramatically, depending upon the particular cryptic species present in a given area. The species complex is confined to the Old World and our samples were collected in Southern Africa, Madagascar and the Ivory Coast. Genomic DNA of 350 randomly sampled individual midges from 19 populations was amplified using four 20-mer primers by the random amplified polymorphic DNA (RAPD) technique. One hundred and ninety-six interpretable polymorphic bands were obtained. Species-specific RAPD profiles were defined and for five species diagnostic RAPD fragments were identified. A high degree of polymorphism was detected in the species complex, most of which was observed within populations (from 64 to 76%). Principal coordinate analysis (PCO) and cluster analysis provided an estimate of the degree of variation between and within populations and species. There was substantial concordance between the taxonomies derived from morphological and molecular data. The amount and the different distributions of genetic (RAPD) variation among the taxa can be associated to their life histories, i.e. the abundance and distribution of the larval breeding sites and their seasonality. |
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Department of Animal Biology, Laboratory of Zoology, University of Pavia, Piazza Botta 9, I-27100 Pavia, Italy |
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0962-1083 |
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Notes |
PMID:11472544 |
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no |
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Call Number |
Equine Behaviour @ team @ |
Serial |
2647 |
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Author |
Macfadden, B.J. |
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Title |
Evolution. Fossil horses--evidence for evolution |
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Journal Article |
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Year |
2005 |
Publication |
Science (New York, N.Y.) |
Abbreviated Journal |
Science |
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Volume |
307 |
Issue |
5716 |
Pages |
1728-1730 |
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Keywords |
Animals; Body Size; DNA, Mitochondrial; Diet; *Equidae/anatomy & histology/classification/genetics; *Evolution; Feeding Behavior; *Fossils; *Horses/anatomy & histology/classification/genetics; Paleodontology; Phylogeny; Time; Tooth/anatomy & histology |
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Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA. bmacfadd@flmnh.ufl.edu |
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1095-9203 |
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PMID:15774746 |
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Serial |
1892 |
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Author |
Wilhelm, W.E.; Anderson, J.H. |
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Title |
Vahlkampfia lobospinosa (Craig. 1912) Craig. 1913: rediscovery of a coprozoic ameba |
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Journal Article |
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Year |
1971 |
Publication |
The Journal of Parasitology |
Abbreviated Journal |
J Parasitol |
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Volume |
57 |
Issue |
6 |
Pages |
1378-1379 |
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Keywords |
Animals; Cattle; Ecology; Feces/microbiology; Horse Diseases/epidemiology; Horses; Protozoan Infections/epidemiology; *Protozoan Infections, Animal; Sarcodina/*classification/growth & development; Swine; Swine Diseases/epidemiology; Tennessee |
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0022-3395 |
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PMID:5157177 |
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no |
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Call Number |
Equine Behaviour @ team @ |
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2724 |
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Author |
Walker, M.L.; Becklund, W.W. |
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Title |
Occurrence of a cattle eyeworm, Thelazia gulosa (Nematoda: Thelaziidae), in an imported giraffe in California and T. lacrymalis in a native horse in Maryland |
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Journal Article |
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Year |
1971 |
Publication |
The Journal of Parasitology |
Abbreviated Journal |
J Parasitol |
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Volume |
57 |
Issue |
6 |
Pages |
1362-1363 |
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Keywords |
Animals; *Animals, Zoo; Artiodactyla; California; Ecology; Eye Diseases/epidemiology/*veterinary; Female; Horse Diseases/*epidemiology; Horses; Male; Maryland; Nematode Infections/epidemiology/*veterinary; Spiruroidea/*classification |
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English |
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0022-3395 |
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PMID:5157171 |
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no |
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Equine Behaviour @ team @ |
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2725 |
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Author |
Clark, T.B.; Peterson, B.V.; Whitcomb, R.F.; Henegar, R.B.; Hackett, K.J.; Tully, J.G. |
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Title |
Spiroplasmas in the Tabanidae |
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Journal Article |
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Year |
1984 |
Publication |
Israel Journal of Medical Sciences |
Abbreviated Journal |
Isr J Med Sci |
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20 |
Issue |
10 |
Pages |
1002-1005 |
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Animals; Diptera/*microbiology/ultrastructure; Ecology; Female; Hemolymph/microbiology; Male; Maryland; North Carolina; Plants/microbiology; Spiroplasma/classification/*isolation & purification/physiology |
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Spiroplasmas were observed in seven species of the family Tabanidae (horse flies and deer flies). This is the fifth family of the order Diptera now known to harbor spiroplasmas. Noncultivable spiroplasmas were seen in the hemolymph of three species of the genus Tabanus, and cultivable forms were isolated from the guts of six species in three genera. Isolates from T. calens and T. sulcifrons were serologically similar and closely related to a spiroplasma in the lampyrid beetle, Ellychnia corrusca. These three isolates represent a new serogroup. Isolates from Hybomitra lasiophthalma were related to Group IV strains, while those from T. nigrovittatus and Chrysops sp. both represented new serogroups. At least some tabanids probably acquire spiroplasmas from contaminated flower surfaces. The possibility of vertebrate reservoirs for some tabanid spiroplasmas remains an open question. |
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0021-2180 |
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PMID:6511308 |
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Equine Behaviour @ team @ |
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2687 |
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Author |
Barros, A.T. |
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Title |
Seasonality and relative abundance of Tabanidae (Diptera) captured on horses in the Pantanal, Brazil |
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Journal Article |
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Year |
2001 |
Publication |
Memorias do Instituto Oswaldo Cruz |
Abbreviated Journal |
Mem Inst Oswaldo Cruz |
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Volume |
96 |
Issue |
7 |
Pages |
917-923 |
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Keywords |
Animals; Brazil; Climate; Diptera/classification/*physiology; Ecology; Horses/*parasitology; Population Dynamics; Seasons; Species Specificity |
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Abstract |
Once a month, from June 1992 to May 1993, collections of tabanids on horse were conducted in the Nhecolandia, Pantanal State of Mato Grosso do Sul, Brazil. Tabanid catches using hand nets were conducted from sunrise to sunset at grassland and cerradao (dense savanna) habitats. A total of 3,442 tabanids from 21 species,12 genera, and 3 subfamilies were collected. Although species abundance varied seasonally depending on habitat, no habitat specificity was observed for the most abundant species. In the grassland, 1,625 (47.2%) tabanids belonging to 19 species were collected, while 1,817 (52.8%) tabanids from 17 species were caught in the cerradao. The number of tabanid species varied from 7 during winter (July/August) to 15 in the spring (October). Tabanus importunus (56%) was the most abundant species, followed by T. occidentalis (8.2%), and T. claripennis (8.1%). The tabanid peak, in October, coincided with the beginning of the rainy season. The population peak of most species, including those with higher vector potential, suggests that the rainy season can be considered as the period of potentially higher risk of mechanical transmission of pathogens by tabanids to horses in the region. |
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Embrapa Pantanal, 79320-900 Corumba, MS, Brasil. thadeu@cpap.embrapa.br |
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English |
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ISSN |
0074-0276 |
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Notes |
PMID:11685255 |
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Call Number |
Equine Behaviour @ team @ |
Serial |
2644 |
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Author |
Milinovich, G.J.; Trott, D.J.; Burrell, P.C.; van Eps, A.W.; Thoefner, M.B.; Blackall, L.L.; Al Jassim, R.A.M.; Morton, J.M.; Pollitt, C.C. |
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Title |
Changes in equine hindgut bacterial populations during oligofructose-induced laminitis |
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Journal Article |
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Year |
2006 |
Publication |
Environmental Microbiology |
Abbreviated Journal |
Environ Microbiol |
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Volume |
8 |
Issue |
5 |
Pages |
885-898 |
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Keywords |
Animal Feed; Animals; Bacteria/classification/*isolation & purification; DNA, Bacterial/analysis; Disease Models, Animal; Feces/microbiology; Foot Diseases/etiology/microbiology/*veterinary; Horse Diseases/*etiology/metabolism/microbiology; Horses; In Situ Hybridization, Fluorescence; Intestines/*microbiology; Oligosaccharides/*administration & dosage/*metabolism; Phylogeny; Polymerase Chain Reaction; RNA, Bacterial/analysis; RNA, Ribosomal, 16S/analysis |
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Abstract |
In the horse, carbohydrate overload is thought to play an integral role in the onset of laminitis by drastically altering the profile of bacterial populations in the hindgut. The objectives of this study were to develop and validate microbial ecology methods to monitor changes in bacterial populations throughout the course of experimentally induced laminitis and to identify the predominant oligofructose-utilizing organisms. Laminitis was induced in five horses by administration of oligofructose. Faecal specimens were collected at 8 h intervals from 72 h before to 72 h after the administration of oligofructose. Hindgut microbiota able to utilize oligofructose were enumerated throughout the course of the experiment using habitat-simulating medium. Isolates were collected and representatives identified by 16S rRNA gene sequencing. The majority of these isolates collected belonged to the genus Streptococcus, 91% of which were identified as being most closely related to Streptococcus infantarius ssp. coli. Furthermore, S. infantarius ssp. coli was the predominant oligofructose-utilizing organism isolated before the onset of lameness. Fluorescence in situ hybridization probes developed to specifically target the isolated Streptococcus spp. demonstrated marked population increases between 8 and 16 h post oligofructose administration. This was followed by a rapid population decline which corresponded with a sharp decline in faecal pH and subsequently lameness at 24-32 h post oligofructose administration. This research suggests that streptococci within the Streptococcus bovis/equinus complex may be involved in the series of events which precede the onset of laminitis in the horse. |
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Address |
Australian Equine Laminitis Research Unit, School of Veterinary Science, The University of Queensland, Queensland, Australia. g.milinovich@uq.edu.au |
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1462-2912 |
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Notes |
PMID:16623745 |
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Call Number |
Equine Behaviour @ team @ |
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2625 |
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Author |
Bertram, D.S. |
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Mosquitoes of British Honduras, with some comments on malaria, and on arbovirus antibodies in man and equines |
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Journal Article |
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Year |
1971 |
Publication |
Transactions of the Royal Society of Tropical Medicine and Hygiene |
Abbreviated Journal |
Trans R Soc Trop Med Hyg |
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Volume |
65 |
Issue |
6 |
Pages |
742-762 |
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Keywords |
Aedes; Animals; Anopheles; Antibodies/*analysis; Arbovirus Infections/*epidemiology/immunology/veterinary; Belize; Culex; *Culicidae/classification; Ecology; Encephalitis Virus, St. Louis/immunology; Encephalitis Virus, Venezuelan Equine/immunology; Horse Diseases/*epidemiology/immunology; Horses; Humans; Insect Vectors; Malaria/*epidemiology; Neutralization Tests; Seasons |
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English |
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0035-9203 |
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Notes |
PMID:4400502 |
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no |
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Call Number |
Equine Behaviour @ team @ |
Serial |
2732 |
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