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Petersen, J.L.; Mickelson, J.R.; Cothran, E.G.; Andersson, L.S.; Axelsson, J.; Bailey, E.; Bannasch, D.; Binns, M.M.; Borges, A.S.; Brama, P.; da Câmara Machado, A.; Distl, O.; Felicetti, M.; Fox-Clipsham, L.; Graves, K.T.; Guérin, G.; Haase, B.; Hasegawa, T.; Hemmann, K.; Hill, E.W.; Leeb, T.; Lindgren, G.; Lohi, H.; Lopes, M.S.; McGivney, B.A.; Mikko, S.; Orr, N.; Penedo, M.C.T.; Piercy, R.J.; Raekallio, M.; Rieder, S.; Røed, K.H.; Silvestrelli, M.; Swinburne, J.; Tozaki, T.; Vaudin, M.; M. Wade, C.; McCue, M.E. |
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Title |
Genetic Diversity in the Modern Horse Illustrated from Genome-Wide SNP Data |
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2013 |
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Plos One |
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Plos One |
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8 |
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1 |
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e54997 |
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Horses were domesticated from the Eurasian steppes 5,000-6,000 years ago. Since then, the use of horses for transportation, warfare, and agriculture, as well as selection for desired traits and fitness, has resulted in diverse populations distributed across the world, many of which have become or are in the process of becoming formally organized into closed, breeding populations (breeds). This report describes the use of a genome-wide set of autosomal SNPs and 814 horses from 36 breeds to provide the first detailed description of equine breed diversity. FST calculations, parsimony, and distance analysis demonstrated relationships among the breeds that largely reflect geographic origins and known breed histories. Low levels of population divergence were observed between breeds that are relatively early on in the process of breed development, and between those with high levels of within-breed diversity, whether due to large population size, ongoing outcrossing, or large within-breed phenotypic diversity. Populations with low within-breed diversity included those which have experienced population bottlenecks, have been under intense selective pressure, or are closed populations with long breed histories. These results provide new insights into the relationships among and the diversity within breeds of horses. In addition these results will facilitate future genome-wide association studies and investigations into genomic targets of selection. |
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Public Library of Science |
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Equine Behaviour @ team @ |
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6214 |
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Pirault, P.; Danvy, S.; Verrier, E.; Leroy, G. |
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Title |
Genetic Structure and Gene Flows within Horses: A Genealogical Study at the French Population Scale |
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2013 |
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Plos One |
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Plos One |
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8 |
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4 |
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e61544 |
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Since horse breeds constitute populations submitted to variable and multiple outcrossing events, we analyzed the genetic structure and gene flows considering horses raised in France. We used genealogical data, with a reference population of 547,620 horses born in France between 2002 and 2011, grouped according to 55 breed origins. On average, individuals had 6.3 equivalent generations known. Considering different population levels, fixation index decreased from an overall species FIT of 1.37%, to an average of -0.07% when considering the 55 origins, showing that most horse breeds constitute populations without genetic structure. We illustrate the complexity of gene flows existing among horse breeds, a few populations being closed to foreign influence, most, however, being submitted to various levels of introgression. In particular, Thoroughbred and Arab breeds are largely used as introgression sources, since those two populations explain together 26% of founder origins within the overall horse population. When compared with molecular data, breeds with a small level of coancestry also showed low genetic distance; the gene pool of the breeds was probably impacted by their reproducer exchanges. |
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Equine Behaviour @ team @ |
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6215 |
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Stanley, C.R.; Dunbar, R.I.M. |
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Consistent social structure and optimal clique size revealed by social network analysis of feral goats, Capra hircus |
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2013 |
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Anim Behav |
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85 |
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Equine Behaviour @ team @ Stanley2013 |
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6253 |
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Baciadonna, L.; McElligott, A.G.; Briefer, E.F. |
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Goats favour personal over social information in an experimental foraging task |
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2013 |
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Peer J |
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1 |
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Equine Behaviour @ team @ Baciadonna2013 |
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6269 |
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Briefer, E.F.; McElligott, A.G. |
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Rescued goats at a sanctuary display positive mood after former neglect |
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2013 |
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Appl Anim Behav Sci |
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146 |
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Equine Behaviour @ team @ Briefer2013 |
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6287 |
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Healy, S.D.; Rowe, C. |
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Costs and benefits of evolving a larger brain: doubts over the evidence that large brains lead to better cognition |
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2013 |
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Anim Behav |
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86 |
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Equine Behaviour @ team @ Healy2013 |
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6317 |
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Preiszner, B.; Vincze, E.; Seress, G.; Papp, S.; Bókony, V.; Liker, A.; Lendvai, Á.Z.; Patras, L.; Pap, P.L.; Vágási, C.I.; Németh, J. |
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Title |
Necessity or capacity? Physiological state predicts problem-solving performance in house sparrows |
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2013 |
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Behavioral Ecology |
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Behav. Ecol. |
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25 |
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1 |
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124-135 |
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Innovative behaviors such as exploiting novel food sources can grant significant fitness benefits for animals, yet little is known about the mechanisms driving such phenomena, and the role of physiology is virtually unexplored in wild species. Two hypotheses predict opposing effects of physiological state on innovation success. On one hand, poor physiological condition may promote innovations by forcing individuals with poor competitive abilities to invent alternative solutions. On the other hand, superior physiological condition may ensure greater cognitive capacity and thereby better problem-solving and learning performance. To test these hypotheses, we studied the behavior of wild-caught house sparrows (Passer domesticus) in 4 novel tasks of food acquisition, one of which was presented to the birds in repeated trials, and we investigated the relationships of individual performance with relevant physiological traits. We found that problem-solving performance across the 4 tasks was moderately consistent within individuals. Birds with lower integrated levels of corticosterone, the main avian stress hormone, solved the most difficult task faster and were more efficient learners in the repeated task than birds with higher corticosterone levels. Birds with higher concentration of total glutathione, a key antioxidant, solved 2 relatively easy tasks faster, whereas birds with fewer coccidian parasites tended to solve the difficult task more quickly. Our results, thus, indicate that aspects of physiological state influence problem-solving performance in a context-dependent manner, and these effects on problem-solving capacity, probably including cognitive abilities, are more likely to drive individual innovation success than necessity due to poor condition. |
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1045-2249 |
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Equine Behaviour @ team @ |
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6552 |
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Author |
Mann Janet; Patterson Eric M. |
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Title |
Tool use by aquatic animals |
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2013 |
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Philosophical Transactions of the Royal Society B: Biological Sciences |
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Phil. Trans. Biol. Sci. |
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368 |
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1630 |
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20120424 |
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Royal Society |
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doi: 10.1098/rstb.2012.0424 |
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Equine Behaviour @ team @ |
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6579 |
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Author |
Hunt, G.R.; Gray R.D.; Taylor, A.H. |
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Title |
Why is tool use rare in animals? |
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2013 |
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Tool Use in Animals: Cognition and Ecology |
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Cambridge University Press |
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Cambridge, MA. |
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anz C, Call J, Boesch C |
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Equine Behaviour @ team @ |
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6658 |
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Lagos, L. |
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Ecología del lobo (Canis lupus), del poni salvaje (Equus ferus atlanticus) y del ganado vacuno semiextensivo (Bos taurus) en Galicia: interacciones depredador-presa. |
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2013 |
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Phd thesis |
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458 |
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Ph.D. thesis |
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Universidad de Santiago de Compostela |
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Santiago de Compostela |
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Equine Behaviour @ team @ |
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6678 |
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