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	Author	Hoy, R.
	Title	Animal awareness: The (un)binding of multisensory cues in decision making by animals			Type	Journal Article
	Year	2005	Publication	Proceedings of the National Academy of Sciences of the United States of America	Abbreviated Journal	Proc. Natl. Acad. Sci. U.S.A.
	Volume	102	Issue	7	Pages	2267-2268
	Keywords	Animals; Anura/physiology; Awareness; Behavior, Animal; Decision Making; Female; Male; Perception; Sensation
	Abstract
	Address	Department of Neurobiology and Behavior, 215 Mudd Hall, Cornell University, Ithaca, NY 14850, USA. rrh3@cornell.edu
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0027-8424	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:15703288			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	2821
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	Author	Uzawa, T.; Akiyama, S.; Kimura, T.; Takahashi, S.; Ishimori, K.; Morishima, I.; Fujisawa, T.
	Title	Collapse and search dynamics of apomyoglobin folding revealed by submillisecond observations of alpha-helical content and compactness			Type	Journal Article
	Year	2004	Publication	Proceedings of the National Academy of Sciences of the United States of America	Abbreviated Journal	Proc. Natl. Acad. Sci. U.S.A.
	Volume	101	Issue	5	Pages	1171-1176
	Keywords	Animals; Apoproteins/chemistry; Circular Dichroism; Cytochromes c/chemistry; Horses; Myoglobin/chemistry; Protein Folding; Protein Structure, Secondary; Scattering, Radiation
	Abstract	The characterization of protein folding dynamics in terms of secondary and tertiary structures is important in elucidating the features of intraprotein interactions that lead to specific folded structures. Apomyoglobin (apoMb), possessing seven helices termed A-E, G, and H in the native state, has a folding intermediate composed of the A, G, and H helices, whose formation in the submillisecond time domain has not been clearly characterized. In this study, we used a rapid-mixing device combined with circular dichroism and small-angle x-ray scattering to observe the submillisecond folding dynamics of apoMb in terms of helical content (f(H)) and radius of gyration (R(g)), respectively. The folding of apoMb from the acid-unfolded state at pH 2.2 was initiated by a pH jump to 6.0. A significant collapse, corresponding to approximately 50% of the overall change in R(g) from the unfolded to native conformation, was observed within 300 micros after the pH jump. The collapsed intermediate has a f(H) of 33% and a globular shape that involves >80% of all its atoms. Subsequently, a stepwise helix formation was detected, which was interpreted to be associated with a conformational search for the correct tertiary contacts. The characterized folding dynamics of apoMb indicates the importance of the initial collapse event, which is suggested to facilitate the subsequent conformational search and the helix formation leading to the native structure.
	Address	Department of Molecular Engineering, Graduate School of Engineering, Kyoto University, Nishikyo, Kyoto 615-8510, Japan
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0027-8424	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:14711991			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	3779
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	Author	Lee, R.D.
	Title	Rethinking the evolutionary theory of aging: transfers, not births, shape senescence in social species			Type	Journal Article
	Year	2003	Publication	Proceedings of the National Academy of Sciences of the United States of America	Abbreviated Journal	Proc Natl Acad Sci U S A
	Volume	100	Issue	16	Pages	9637-9642
	Keywords	Adaptation, Physiological; Aging; Animals; Biological Evolution; Demography; Economics; Environment; Fertility; Humans; Life Expectancy; Longevity; Models, Theoretical; Parturition; Population Dynamics; Population Growth; Reproduction
	Abstract	The classic evolutionary theory of aging explains why mortality rises with age: as individuals grow older, less lifetime fertility remains, so continued survival contributes less to reproductive fitness. However, successful reproduction often involves intergenerational transfers as well as fertility. In the formal theory offered here, age-specific selective pressure on mortality depends on a weighted average of remaining fertility (the classic effect) and remaining intergenerational transfers to be made to others. For species at the optimal quantity-investment tradeoff for offspring, only the transfer effect shapes mortality, explaining postreproductive survival and why juvenile mortality declines with age. It also explains the evolution of lower fertility, longer life, and increased investments in offspring.
	Address	Department of Demography, University of California, 2232 Piedmont Avenue, Berkeley, CA 94720-2120, USA. rlee@demog.berkeley.edu
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0027-8424	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:12878733			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	5465
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	Author	Freire, R.; Wilkins, L.J.; Short, F.; Nicol, C.J.
	Title	Behaviour and welfare of individual laying hens in a non-cage system			Type	Journal Article
	Year	2003	Publication	British poultry science	Abbreviated Journal	Br Poult Sci
	Volume	44	Issue	1	Pages	22-29
	Keywords	Animal Welfare; Animals; Behavior, Animal; Chickens; Female; Housing, Animal/standards; Oviposition
	Abstract	1. A leg band containing a transponder was fitted to 80 birds in a perchery containing 1,000 birds. 2. The transponder emitted a unique identification number when a bird walked on one of 8 flat antennae on the floor. The recording apparatus was used to measure the amount of time that each of the tagged birds spent on the slatted and littered areas in a 6-week period. 3. Some birds spent long periods of time on the slats, possibly as a means of avoiding repeated attacks. Duration on the slats was greatest in birds with the worst (as opposed to better) feather scores of the head, back and tail regions. 4. Birds that spent long periods on the slats were lighter than other birds at both 39 weeks of age and 72 weeks of age and had greater back, head and tail feather damage, consistent with these birds being victims of pecking. 5. Tagged birds received a social avoidance test outside the perchery at 39 weeks of age, which suggested that birds retreated to the slats in response to pecks rather than just to close proximity to other birds. 6. The failure to find that duration on the slats was related to anatomical indicators of stress (liver, spleen and bursa of Fabricius) suggests that retreating to the slats following pecking attenuates physiological stress responses. 7. We conclude that the provision of areas where birds in a large group can avoid pecking may improve the welfare of a minority of victimised birds.
	Address	Department of Clinical Veterinary Science, University of Bristol, Langford, Bristol, England. rkfreire@hotmail.com
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0007-1668	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:12737221			Approved	no
	Call Number	refbase @ user @			Serial	82
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	Author	Nicol, C.J.; Potzsch, C.; Lewis, K.; Green, L.E.
	Title	Matched concurrent case-control study of risk factors for feather pecking in hens on free-range commercial farms in the UK			Type	Journal Article
	Year	2003	Publication	British poultry science	Abbreviated Journal	Br Poult Sci
	Volume	44	Issue	4	Pages	515-523
	Keywords	Aggression; Analysis of Variance; Animal Husbandry/methods; Animals; Case-Control Studies; Chickens/physiology; Feathers; Female; Multivariate Analysis; Odds Ratio; Regression Analysis; Species Specificity
	Abstract	1. The aim of the study was to compare the management and husbandry of free-range flocks in the UK where feather pecking was either present (case) or absent (control). 2. One hundred flocks were enrolled into a concurrent case-control study: 50 where birds had recently started feather pecking, and 50 matched control flocks where birds of the same age had not started feather pecking. 3. Information was obtained from a detailed interview with the flock manager, and by direct inspection of the flock, house and range. 4. Initial univariate analyses revealed that case flocks were more likely to comprise ISA Brown than Lohmann, were more likely to be restricted from litter areas to prevent floor eggs, and were less likely to use the outside range. 5. Cluster analysis indicated that feather pecking was not associated with any particular husbandry system. 6. The only influential risk factor significant in the multivariable conditional logistic regression analysis was use of the outdoor range. The risk of feather pecking was reduced 9-fold in flocks where more than 20% of birds used the range on sunny days (odds ratio = 0.12). Use of the range was positively associated with the presence of trees and/or hedges on the range.
	Address	Department of Clinical Veterinary Science, University of Bristol, England. c.j.nicol@bris.ac.uk
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0007-1668	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:14584840			Approved	no
	Call Number	refbase @ user @			Serial	79
Permanent link to this record



	Author	Wittig, R.M.; Crockford, C.; Wikberg, E.; Seyfarth, R.M.; Cheney, D.L.
	Title	Kin-mediated reconciliation substitutes for direct reconciliation in female baboons			Type	Journal Article
	Year	2007	Publication	Proceedings. Biological sciences / The Royal Society	Abbreviated Journal	Proc Biol Sci
	Volume	274	Issue	1613	Pages	1109-1115
	Keywords
	Abstract	It has been hypothesized that group-living mammals engage in reconciliation (post-conflict affiliation between former opponents) to reduce the disruptive costs of aggression and restore opponents' tolerance to baseline levels. Recipients of aggression are sometimes reluctant to tolerate the proximity of a recent opponent, however, in apparent fear that aggression will be renewed. In such cases, reconciliatory behaviour by the aggressor's close kin may substitute for direct reconciliation. We describe a playback experiment with free-ranging baboons (Papio hamadryas ursinus) that examines whether friendly behaviour by the aggressor's kin can substitute for direct reconciliation by the aggressor herself. In the test condition, female subjects who had recently been threatened heard the friendly grunt of one of their aggressor's relatives, mimicking kin-mediated vocal reconciliation. In the control condition, subjects heard the grunt of a dominant female from a different matriline. Subjects responded significantly more strongly in test than in control trials. Moreover, in the next hour they were significantly more likely to tolerate the proximity of both their aggressor and the relative whose grunt they had heard. In contrast, subjects' behaviour towards both control females and other members of their aggressor's matriline was unaffected. We conclude that kin-mediated vocal reconciliation can substitute for direct reconciliation in baboons.
	Address	Department of Biology, University of Pennsylvania, Philadelphia, PA 19104-6018, USA
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0962-8452	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:17301022			Approved	no
	Call Number	refbase @ user @			Serial	342
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	Author	Bergman, T.J.; Beehner, J.C.; Cheney, D.L.; Seyfarth, R.M.
	Title	Hierarchical classification by rank and kinship in baboons			Type	Journal Article
	Year	2003	Publication	Science (New York, N.Y.)	Abbreviated Journal	Science
	Volume	302	Issue	5648	Pages	1234-1236
	Keywords	Animals; Animals, Wild; Botswana; Cognition; Family; Female; Hierarchy, Social; Language; *Papio/psychology; Social Dominance; Vocalization, Animal
	Abstract	Humans routinely classify others according to both their individual attributes, such as social status or wealth, and membership in higher order groups, such as families or castes. They also recognize that people's individual attributes may be influenced and regulated by their group affiliations. It is not known whether such rule-governed, hierarchical classifications are specific to humans or might also occur in nonlinguistic species. Here we show that baboons recognize that a dominance hierarchy can be subdivided into family groups. In playback experiments, baboons respond more strongly to call sequences mimicking dominance rank reversals between families than within families, indicating that they classify others simultaneously according to both individual rank and kinship. The selective pressures imposed by complex societies may therefore have favored cognitive skills that constitute an evolutionary precursor to some components of human cognition.
	Address	Department of Biology, University of Pennsylvania, Philadelphia, PA 19104, USA. thore@sas.upenn.edu
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1095-9203	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:14615544			Approved	no
	Call Number	refbase @ user @			Serial	689
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	Author	Real, L.A.
	Title	Animal choice behavior and the evolution of cognitive architecture			Type	Journal Article
	Year	1991	Publication	Science (New York, N.Y.)	Abbreviated Journal	Science
	Volume	253	Issue	5023	Pages	980-986
	Keywords	Animals; Bees/genetics/physiology; Biomechanics; Choice Behavior; Cognition; Evolution; Mathematics; Models, Genetic; Probability
	Abstract	Animals process sensory information according to specific computational rules and, subsequently, form representations of their environments that form the basis for decisions and choices. The specific computational rules used by organisms will often be evolutionarily adaptive by generating higher probabilities of survival, reproduction, and resource acquisition. Experiments with enclosed colonies of bumblebees constrained to foraging on artificial flowers suggest that the bumblebee's cognitive architecture is designed to efficiently exploit floral resources from spatially structured environments given limits on memory and the neuronal processing of information. A non-linear relationship between the biomechanics of nectar extraction and rates of net energetic gain by individual bees may account for sensitivities to both the arithmetic mean and variance in reward distributions in flowers. Heuristic rules that lead to efficient resource exploitation may also lead to subjective misperception of likelihoods. Subjective probability formation may then be viewed as a problem in pattern recognition subject to specific sampling schemes and memory constraints.
	Address	Department of Biology, University of North Carolina, Chapel Hill 27599-3280
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0036-8075	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:1887231			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	2846
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	Author	Nocera, J.J.; Forbes, G.J.; Giraldeau, L.-A.
	Title	Inadvertent social information in breeding site selection of natal dispersing birds			Type	Journal Article
	Year	2006	Publication	Proceedings. Biological Sciences / The Royal Society	Abbreviated Journal	Proc Biol Sci
	Volume	273	Issue	1584	Pages	349-355
	Keywords	Animals; Behavior, Animal; Breeding; Environment; Female; Logistic Models; Male; Songbirds/growth & development/physiology
	Abstract	Several species use the number of young produced as public information (PI) to assess breeding site quality. PI is inaccessible for synchronously breeding birds because nests are empty by the time the young can collect this information. We investigate if location cues are the next best source of inadvertent social information (ISI) used by young prospectors during breeding site choice. We experimentally deployed ISI as decoys and song playbacks of breeding males in suitable and sub-optimal habitats during pre- and post-breeding periods, and monitored territory establishment during the subsequent breeding season for a social, bobolink (Dolichonyx oryzivorus), and a more solitary species, Nelson's sharp-tailed sparrow (Ammodramus nelsoni). The sparrows did not respond to treatments, but bobolinks responded strongly to post-breeding location cues, irrespective of habitat quality. The following year, 17/20 sub-optimal plots to which bobolink males were recruited were defended for at least two weeks, indicating that song heard the previous year could exert a “carry-over attraction” effect on conspecifics the following year. Sixteen recruited males were natal dispersers, as expected when animals have little opportunity to directly sample their natal habitat quality. We suggest that differences in breeding synchronicity may induce an equivalent clinal distribution of ISI use.
	Address	Department of Biology, University of New Brunswick, Bag Service #45111, Fredericton, NB E3B 6E1, Canada. j.nocera@unb.ca
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0962-8452	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:16543178			Approved	no
	Call Number				Serial	2129
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	Author	Dugatkin, L.A.; Godin, J.G.
	Title	*Reversal of female mate choice by copying in the guppy (Poecilia reticulata)*			Type	Journal Article
	Year	1992	Publication	Proceedings. Biological sciences / The Royal Society	Abbreviated Journal	Proc Biol Sci
	Volume	249	Issue	1325	Pages	179-184
	Keywords	Acclimatization; Animals; Choice Behavior; Female; Male; Poecilia; Sexual Behavior, Animal
	Abstract	Ever since Fisher (1958) formalized models of sexual selection, female mate choice has been assumed to be a genetically determined trait. Females, however, may also use social cues to select mates. One such cue might be the mate choice of conspecifics. Here we report the first direct evidence that a female's preference for a particular male can in fact be reversed by social cues. In our experiments using the Trinidadian guppy (Poecilia reticulata), this reversal was mediated by mate-copying opportunities, such that a female (the 'focal' female) is given the opportunity to choose between two males, followed by a period in which she observes a second female (the 'model' female) displaying a preference for the male she herself did not prefer initially. When allowed to choose between the same males a second time, compared with control tests, a significant proportion of focal females reversed their mate choice and copied the preference of the model female. These results provide strong evidence for the role of non-genetic factors in sexual selection and underlie the need for new models of sexual selection that explicitly incorporate both genetic and cultural aspects of mate choice.
	Address	Department of Biology, Mount Allison University, Sackville, New Brunswick, Canada
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0962-8452	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:1360679			Approved	no
	Call Number				Serial	1824
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