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Author Hostikka, S.L.; Eddy, R.L.; Byers, M.G.; Hoyhtya, M.; Shows, T.B.; Tryggvason, K. url  doi
openurl 
  Title Identification of a distinct type IV collagen alpha chain with restricted kidney distribution and assignment of its gene to the locus of X chromosome-linked Alport syndrome Type Journal Article
  Year 1990 Publication Proceedings of the National Academy of Sciences of the United States of America Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 87 Issue 4 Pages 1606-1610  
  Keywords Amino Acid Sequence; Base Sequence; Chromosome Mapping; Cloning, Molecular; Collagen/*genetics; Epitopes/analysis; Female; Fluorescent Antibody Technique; Gene Library; *Genes; Humans; Immunoblotting; Kidney/cytology/*metabolism; Macromolecular Substances; Molecular Sequence Data; Nephritis, Hereditary/*genetics; Oligopeptides/chemical synthesis/immunology; Placenta/metabolism; Pregnancy; Restriction Mapping; Sequence Homology, Nucleic Acid; *X Chromosome  
  Abstract (down) We have identified and extensively characterized a type IV collagen alpha chain, referred to as alpha 5(IV). Four overlapping cDNA clones isolated contain an open reading frame for 543 amino acid residues of the carboxyl-terminal end of a collagenous domain, a 229-residue carboxyl-terminal noncollagenous domain, and 1201 base pairs coding for a 3' untranslated region. The collagenous Gly-Xaa-Yaa repeat sequence has five imperfections that coincide with those in the corresponding region of the alpha 1(IV) chain. The noncollagenous domain has 12 conserved cysteine residues and 83% and 63% sequence identity with the noncollagenous domains of the alpha 1(IV) and alpha 2(IV) chains, respectively. The alpha 5(IV) chain has less sequence identity with the putative bovine alpha 3(IV) and alpha 4(IV) chains. Antiserum against an alpha 5(IV) synthetic peptide stained a polypeptide chain of about 185 kDa by immunoblot analysis and immunolocalization of the chain in human kidney was almost completely restricted to the glomerulus. The gene was assigned to the Xq22 locus by somatic cell hybrids and in situ hybridization. This may be identical or close to the locus of the X chromosome-linked Alport syndrome that is believed to be a type IV collagen disease.  
  Address Biocenter, University of Oulu, Finland  
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  Language English Summary Language Original Title  
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  ISSN 0027-8424 ISBN Medium  
  Area Expedition Conference  
  Notes PMID:1689491 Approved no  
  Call Number Equine Behaviour @ team @ Serial 5291  
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Author Begall, S.; Cervený, J.; Neef, J.; Vojtech, O.; Burda, H. url  doi
openurl 
  Title Magnetic alignment in grazing and resting cattle and deer Type Journal Article
  Year 2008 Publication Proceedings of the National Academy of Sciences of the United States of America Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 105 Issue 36 Pages 13451-13455  
  Keywords  
  Abstract (down) We demonstrate by means of simple, noninvasive methods (analysis of satellite images, field observations, and measuring “deer beds” in snow) that domestic cattle (n = 8,510 in 308 pastures) across the globe, and grazing and resting red and roe deer (n = 2,974 at 241 localities), align their body axes in roughly a north–south direction. Direct observations of roe deer revealed that animals orient their heads northward when grazing or resting. Amazingly, this ubiquitous phenomenon does not seem to have been noticed by herdsmen, ranchers, or hunters. Because wind and light conditions could be excluded as a common denominator determining the body axis orientation, magnetic alignment is the most parsimonious explanation. To test the hypothesis that cattle orient their body axes along the field lines of the Earth's magnetic field, we analyzed the body orientation of cattle from localities with high magnetic declination. Here, magnetic north was a better predictor than geographic north. This study reveals the magnetic alignment in large mammals based on statistically sufficient sample sizes. Our findings open horizons for the study of magnetoreception in general and are of potential significance for applied ethology (husbandry, animal welfare). They challenge neuroscientists and biophysics to explain the proximate mechanisms.  
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  Notes 10.1073/pnas.0803650105 Approved no  
  Call Number Equine Behaviour @ team @ Serial 5316  
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Author Biegler, R.; McGregor, A.; Krebs, J.R.; Healy, S.D. url  doi
openurl 
  Title A larger hippocampus is associated with longer-lasting spatial memory Type Journal Article
  Year 2001 Publication Proceedings of the National Academy of Sciences of the United States of America Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 98 Issue 12 Pages 6941-6944  
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  Abstract (down) Volumetric studies in a range of animals (London taxi-drivers, polygynous male voles, nest-parasitic female cowbirds, and a number of food-storing birds) have shown that the size of the hippocampus, a brain region essential to learning and memory, is correlated with tasks involving an extra demand for spatial learning and memory. In this paper, we report the quantitative advantage that food storers gain from such an enlargement. Coal tits () a food-storing species, performed better than great tits (), a nonstoring species, on a task that assessed memory persistence but not on a task that assessed memory resolution or on one that tested memory capacity. These results show that the advantage to the food-storing species associated with an enlarged hippocampus is one of memory persistence.  
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  Notes 10.1073/pnas.121034798 Approved no  
  Call Number Equine Behaviour @ team @ Serial 4743  
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Author Sol, D.; Duncan, R.P.; Blackburn, T.M.; Cassey, P.; Lefebvre, L. url  doi
openurl 
  Title Big brains, enhanced cognition, and response of birds to novel environments Type Journal Article
  Year 2005 Publication Proceedings of the National Academy of Sciences of the United States of America Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 102 Issue 15 Pages 5460-5465  
  Keywords  
  Abstract (down) The widely held hypothesis that enlarged brains have evolved as an adaptation to cope with novel or altered environmental conditions lacks firm empirical support. Here, we test this hypothesis for a major animal group (birds) by examining whether large-brained species show higher survival than small-brained species when introduced to nonnative locations. Using a global database documenting the outcome of >600 introduction events, we confirm that avian species with larger brains, relative to their body mass, tend to be more successful at establishing themselves in novel environments. Moreover, we provide evidence that larger brains help birds respond to novel conditions by enhancing their innovation propensity rather than indirectly through noncognitive mechanisms. These findings provide strong evidence for the hypothesis that enlarged brains function, and hence may have evolved, to deal with changes in the environment.  
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  Notes 10.1073/pnas.0408145102 Approved no  
  Call Number Equine Behaviour @ team @ Serial 4739  
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Author Leadbeater, E.; Dawson, E.H. url  openurl
  Title A social insect perspective on the evolution of social learning mechanisms Type Journal Article
  Year 2017 Publication Proceedings of the National Academy of Sciences Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 114 Issue 30 Pages 7838-7845  
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  Abstract (down) The social world offers a wealth of opportunities to learn from others, and across the animal kingdom individuals capitalize on those opportunities. Here, we explore the role of natural selection in shaping the processes that underlie social information use, using a suite of experiments on social insects as case studies. We illustrate how an associative framework can encompass complex, context-specific social learning in the insect world and beyond, and based on the hypothesis that evolution acts to modify the associative process, suggest potential pathways by which social information use could evolve to become more efficient and effective. Social insects are distant relatives of vertebrate social learners, but the research we describe highlights routes by which natural selection could coopt similar cognitive raw material across the animal kingdom.  
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  Notes 10.1073/pnas.1620744114 Approved no  
  Call Number Equine Behaviour @ team @ Serial 6189  
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Author Bergstrom, C.T.; Lachmann, M. openurl 
  Title Signaling among relatives. III. Talk is cheap Type Journal Article
  Year 1998 Publication Proceedings of the National Academy of Sciences of the United States of America Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 95 Issue 9 Pages 5100-5105  
  Keywords Animal Communication; Animals; Costs and Cost Analysis; *Evolution; Interpersonal Relations; Models, Biological  
  Abstract (down) The Sir Philip Sidney game has been used by numerous authors to show how signal cost can facilitate honest signaling among relatives. Here, we demonstrate that, in this game, honest cost-free signals are possible as well, under very general conditions. Moreover, these cost-free signals are better for all participants than the previously explored alternatives. Recent empirical evidence suggests that begging is energetically inexpensive for nestling birds; this finding led some researchers to question the applicability of the costly signaling framework to nestling begging. Our results show that cost-free or inexpensive signals, as observed empirically, fall within the framework of signaling theory.  
  Address Department of Biological Sciences, Stanford University, Stanford, CA 94305, USA. carl@charles.stanford.edu  
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  ISSN 0027-8424 ISBN Medium  
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  Notes PMID:9560235 Approved no  
  Call Number refbase @ user @ Serial 561  
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Author Ballew, R.M.; Sabelko, J.; Gruebele, M. openurl 
  Title Direct observation of fast protein folding: the initial collapse of apomyoglobin Type Journal Article
  Year 1996 Publication Proceedings of the National Academy of Sciences of the United States of America Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 93 Issue 12 Pages 5759-5764  
  Keywords Animals; Apoproteins/*chemistry; Circular Dichroism; Horses; Kinetics; Muscle, Skeletal/chemistry; Myoglobin/*chemistry; *Protein Folding; Spectrometry, Fluorescence; Spectrophotometry, Infrared; Temperature  
  Abstract (down) The rapid refolding dynamics of apomyoglobin are followed by a new temperature-jump fluorescence technique on a 15-ns to 0.5-ms time scale in vitro. The apparatus measures the protein-folding history in a single sweep in standard aqueous buffers. The earliest steps during folding to a compact state are observed and are complete in under 20 micros. Experiments on mutants and consideration of steady-state CD and fluorescence spectra indicate that the observed microsecond phase monitors assembly of an A x (H x G) helix subunit. Measurements at different viscosities indicate diffusive behavior even at low viscosities, in agreement with motions of a solvent-exposed protein during the initial collapse.  
  Address School of Chemical Sciences and Beckman Institute for Advanced Science and Technology, University of Illinois, Urbana, 61801, USA  
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  Notes PMID:8650166 Approved no  
  Call Number Equine Behaviour @ team @ Serial 3798  
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Author Jansen, T.; Forster, P.; Levine, M.A.; Oelke, H.; Hurles, M.; Renfrew, C.; Weber, J.; Olek, K. doi  openurl
  Title Mitochondrial DNA and the origins of the domestic horse Type Journal Article
  Year 2002 Publication Proceedings of the National Academy of Sciences of the United States of America Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 99 Issue 16 Pages 10905-10910  
  Keywords Animals; Animals, Domestic/classification/*genetics; Base Sequence; DNA, Complementary; *DNA, Mitochondrial; *Evolution, Molecular; Horses/classification/*genetics; Molecular Sequence Data; Phylogeny  
  Abstract (down) The place and date of the domestication of the horse has long been a matter for debate among archaeologists. To determine whether horses were domesticated from one or several ancestral horse populations, we sequenced the mitochondrial D-loop for 318 horses from 25 oriental and European breeds, including American mustangs. Adding these sequences to previously published data, the total comes to 652, the largest currently available database. From these sequences, a phylogenetic network was constructed that showed that most of the 93 different mitochondrial (mt)DNA types grouped into 17 distinct phylogenetic clusters. Several of the clusters correspond to breeds and/or geographic areas, notably cluster A2, which is specific to Przewalski's horses, cluster C1, which is distinctive for northern European ponies, and cluster D1, which is well represented in Iberian and northwest African breeds. A consideration of the horse mtDNA mutation rate together with the archaeological timeframe for domestication requires at least 77 successfully breeding mares recruited from the wild. The extensive genetic diversity of these 77 ancestral mares leads us to conclude that several distinct horse populations were involved in the domestication of the horse.  
  Address Biopsytec Analytik GmbH, Marie-Curie-Strasse 1, 53359 Rheinbach, Germany. jansen@biopsytec.com  
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  ISSN 0027-8424 ISBN Medium  
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  Notes PMID:12130666 Approved no  
  Call Number refbase @ user @ Serial 772  
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Author Lergetporer, P.; Angerer, S.; Glätzle-Rützler, D.; Sutter, M. url  doi
openurl 
  Title Third-party punishment increases cooperation in children through (misaligned) expectations and conditional cooperation Type Journal Article
  Year 2014 Publication Proceedings of the National Academy of Sciences Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 111 Issue 19 Pages 6916-6921  
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  Abstract (down) The human ability to establish cooperation, even in large groups of genetically unrelated strangers, depends upon the enforcement of cooperation norms. Third-party punishment is one important factor to explain high levels of cooperation among humans, although it is still somewhat disputed whether other animal species also use this mechanism for promoting cooperation. We study the effectiveness of third-party punishment to increase children’s cooperative behavior in a large-scale cooperation game. Based on an experiment with 1,120 children, aged 7 to 11 y, we find that the threat of third-party punishment more than doubles cooperation rates, despite the fact that children are rarely willing to execute costly punishment. We can show that the higher cooperation levels with third-party punishment are driven by two components. First, cooperation is a rational (expected payoff-maximizing) response to incorrect beliefs about the punishment behavior of third parties. Second, cooperation is a conditionally cooperative reaction to correct beliefs that third party punishment will increase a partner’s level of cooperation.  
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  Call Number Equine Behaviour @ team @ Serial 5805  
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Author Frère, C.H.; Krützen, M.; Mann, J.; Connor, R.C.; Bejder, L.; Sherwin, W.B. url  doi
openurl 
  Title Social and genetic interactions drive fitness variation in a free-living dolphin population Type Journal Article
  Year 2010 Publication Proc Natl Acad Sci USA Abbreviated Journal Proc. Natl. Acad. Sci. U.S.A.  
  Volume 107 Issue 46 Pages 19949-19954  
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  Abstract (down) The evolutionary forces that drive fitness variation in species are of considerable interest. Despite this, the relative importance and interactions of genetic and social factors involved in the evolution of fitness traits in wild mammalian populations are largely unknown. To date, a few studies have demonstrated that fitness might be influenced by either social factors or genes in natural populations, but none have explored how the combined effect of social and genetic parameters might interact to influence fitness. Drawing from a long-term study of wild bottlenose dolphins in the eastern gulf of Shark Bay, Western Australia, we present a unique approach to understanding these interactions. Our study shows that female calving success depends on both genetic inheritance and social bonds. Moreover, we demonstrate that interactions between social and genetic factors also influence female fitness. Therefore, our study represents a major methodological advance, and provides critical insights into the interplay of genetic and social parameters of fitness.  
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  Notes Approved no  
  Call Number Equine Behaviour @ team @ Serial 6412  
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