| Records |
| Author |
Kavar, T.; Dovc, P. |
| Title |
Domestication of the horse: Genetic relationships between domestic and wild horses |
Type |
Journal Article |
| Year |
2008 |
Publication |
Livestock Science |
Abbreviated Journal  |
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| Volume |
116 |
Issue |
1-3 |
Pages |
1-14 |
| Keywords |
Equus caballus; Domestication; Mitochondrial DNA (mtDNA); Y chromosome markers |
| Abstract |
To date, a large amount of equine genetic data has been obtained regarding (i) extant domestic horses of various breeds from all over the world, (ii) ancient domestic horses, (iii) the extant Przewalski's wild horse, and (iv) the late Pleistocene wild horse from Eurasia and North America. Here, a review of mtDNA and Y chromosome marker analyses is presented in the context of horse domestication. High matrilineal (mtDNA) diversity, which can be found in both extant and ancient (domestic and wild) horses, has suggested that a high number of wild (and tamed) mares were domesticated. Alternatively, Y chromosome marker analysis revealed a single haplotype in all domestic horses analyzed; interestingly even a small population of extant Przewalski's wild horses showed two different Y chromosome haplotypes. It seems that an extreme male population bottleneck occurred due to domestication, while reduction in the female population was only moderate, leaving about 100 distinct haplotypes. For this reason, we speculate that domestication might have started when the appropriate stallion was found or was obtained by selection. Perhaps it had some unusual but special characteristics which could have accelerated the process of domestication. We doubt that only a single Y chromosome haplotype will be found in present-day domestic horses if there are no important differences between the founder stallion/s and the other stallions that were not included in the domestication. In the Eneolithic, tamed and wild mares have probably been spread all over Eurasia, although the number of animals was most likely very low and the populations were limited to a restricted area (e.g., taming centers). Only two subspecies of wild horses (Tarpan and Przewalski's wild horse) have survived up to recently. During the further process of domestication, mares (tamed or wild) were preferentially crossed to stallions having more desirable characteristics. We assume that mares from different regions varied in their morphology due to adaptation to their local environmental conditions. These data might explain rapid expansion of horse populations, as well as their rapid differentiation into various phenotypes during the early phase of domestication. |
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Edition |
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| ISSN |
1871-1413 |
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no |
| Call Number |
Equine Behaviour @ team @ |
Serial |
4771 |
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| Author |
Machmoum, M.; Badaoui, B.; Petit, D.; Germot, A.; El Alaoui, M.A.; Boujenane, I.; Piro, M. |
| Title |
Genetic Diversity and Maternal Phylogenetic Relationships among Populations and Strains of Arabian Show Horses |
Type |
Journal Article |
| Year |
2023 |
Publication |
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Abbreviated Journal |
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Issue |
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Pages |
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| Keywords |
genetic variability; whole D-loop mitochondrial DNA; desert-bred; straight Egyptian; Polish Arabian; traditional Arabian horse classification |
| Abstract |
Genetic diversity and phylogenetic relationships within the Arabian show horse populations are of particular interest to breeders worldwide. Using the complete mitochondrial DNA D-loop sequence (916 pb), this study aimed (i) to understand the genetic relationship between three populations, the Desert-Bred (DB), a subset of the Kingdom of Saudi Arabia (KSA), United Arab Emirates (UAE) and Bahrain (BAH), the Straight Egyptian (EG) and the Polish bloodline (PL), and (ii) to assess the accuracy of the traditional strain classification system based on maternal lines, as stated by the Bedouin culture. To that end, we collected 211 hair samples from stud farms renowned for breeding Arabian show horses from Nejd KSA, Bahrain, Egypt, Qatar, Morocco, UAE, and Poland. The phylogenetic and network analyses of the whole mitochondrial DNA D-loop sequence highlighted a great genetic diversity among the Arabian horse populations, in which about 75% of variance was assigned to populations and 25% to strains. The discriminant analysis of principal components illustrated a relative distinction between those populations. A clear subdivision between traditional strains was found in PL, in contrast to the situation of DB and EG populations. However, several Polish horse individuals could not be traced back to the Bedouin tribes by historical documentation and were shown to differ genetically from other studied Bedouin strains, hence motivating extended investigations. |
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Series Title |
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Abbreviated Series Title |
Animals |
| Series Volume |
13 |
Series Issue |
12 |
Edition |
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| ISSN |
2076-2615 |
ISBN |
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Medium |
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Expedition |
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Conference |
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Approved |
no |
| Call Number |
Equine Behaviour @ team @ |
Serial |
6709 |
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| Author |
Ishida, N.; Hirano, T.; Mukoyama, H. |
| Title |
Detection of aberrant alleles in the D-loop region of equine mitochondrial DNA by single-strand conformation polymorphism (SSCP) analysis |
Type |
Journal Article |
| Year |
1994 |
Publication |
Animal Genetics |
Abbreviated Journal |
Anim Genet |
| Volume |
25 |
Issue |
4 |
Pages |
287 |
| Keywords |
*Alleles; Animals; Base Sequence; *DNA, Mitochondrial; DNA, Single-Stranded/genetics; Female; Gene Frequency; Genomic Imprinting; Horses/*genetics; Male; Molecular Sequence Data; Pedigree; *Polymorphism, Genetic |
| Abstract |
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| Address |
Laboratory of Molecular and Cellular Biology, Japan Racing Association, Tokyo |
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Editor |
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| Language |
English |
Summary Language |
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Original Title |
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Series Title |
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Abbreviated Series Title |
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Series Issue |
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Edition |
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| ISSN |
0268-9146 |
ISBN |
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Medium |
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Expedition |
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Conference |
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| Notes |
PMID:7985852 |
Approved |
no |
| Call Number |
Equine Behaviour @ team @ |
Serial |
2213 |
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| Author |
Breen, M.; Downs, P.; Irvin, Z.; Bell, K. |
| Title |
Intrageneric amplification of horse microsatellite markers with emphasis on the Przewalski's horse (E. przewalskii) |
Type |
Journal Article |
| Year |
1994 |
Publication |
Animal Genetics |
Abbreviated Journal |
Anim Genet |
| Volume |
25 |
Issue |
6 |
Pages |
401-405 |
| Keywords |
Animals; DNA, Satellite/*genetics; *Gene Amplification; Gene Frequency; *Genetic Markers; Heterozygote; Horses/*genetics; Species Specificity |
| Abstract |
Primer sequences flanking 13 microsatellite loci isolated from the domestic horse (E. caballus) were successfully used to amplify homologous loci in the Przewalski's horse (E. przewalskii). The results demonstrate that the level of polymorphism at all 13 loci in the Przewalski's horse was comparable to that in the domestic horse and the overall exclusion probability in the Przewalski's horse was calculated to be 0.9994. The results suggest that it should be possible to use E. caballus-derived microsatellite markers to provide parentage verification and additional valuable information to the captive management of E. przewalskii. The ability to amplify corresponding loci in the remaining five species of the genus was also confirmed, illustrating the general application of markers isolated from the domestic horse to the evaluation of polymorphism in the other six species of the genus. |
| Address |
Australian Equine Blood Typing Research Laboratory, University of Queensland, St Lucia |
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English |
Summary Language |
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Original Title |
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Series Title |
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Abbreviated Series Title |
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| Series Volume |
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Series Issue |
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Edition |
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| ISSN |
0268-9146 |
ISBN |
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Expedition |
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Conference |
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| Notes |
PMID:7695120 |
Approved |
no |
| Call Number |
Equine Behaviour @ team @ |
Serial |
2246 |
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| Author |
Wallner, B.; Brem, G.; Muller, M.; Achmann, R. |
| Title |
Fixed nucleotide differences on the Y chromosome indicate clear divergence between Equus przewalskii and Equus caballus |
Type |
Journal Article |
| Year |
2003 |
Publication |
Animal Genetics |
Abbreviated Journal |
Anim Genet |
| Volume |
34 |
Issue |
6 |
Pages |
453-456 |
| Keywords |
Animals; Base Sequence; DNA, Mitochondrial/genetics; Genetic Variation/*genetics; Horses/classification/*genetics; Male; Molecular Sequence Data; Phylogeny; Probability; Species Specificity; Y Chromosome/*genetics |
| Abstract |
The phylogenetic relationship between Equus przewalskii and E. caballus is often a matter of debate. Although these taxa have different chromosome numbers, they do not form monophyletic clades in a phylogenetic tree based on mtDNA sequences. Here we report sequence variation from five newly identified Y chromosome regions of the horse. Two fixed nucleotide differences on the Y chromosome clearly display Przewalski's horse and domestic horse as sister taxa. At both positions the Przewalski's horse haplotype shows the ancestral state, in common with the members of the zebra/ass lineage. We discuss the factors that may have led to the differences in mtDNA and Y-chromosomal observations. |
| Address |
Institut fur Tierzucht und Genetik, Veterinarmedizinische Universitat Wien, Veterinarplatz, Wien, Austria. wallner@i122server.vu-wien.ac.at |
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English |
Summary Language |
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Abbreviated Series Title |
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Edition |
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0268-9146 |
ISBN |
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Conference |
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| Notes |
PMID:14687077 |
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no |
| Call Number |
Equine Behaviour @ team @ |
Serial |
5038 |
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| Author |
Oakenfull, E.A.; Ryder, O.A. |
| Title |
Mitochondrial control region and 12S rRNA variation in Przewalski's horse (Equus przewalskii) |
Type |
Journal Article |
| Year |
1998 |
Publication |
Animal Genetics |
Abbreviated Journal |
Anim Genet |
| Volume |
29 |
Issue |
6 |
Pages |
456-459 |
| Keywords |
Animals; DNA, Mitochondrial/*genetics; Female; *Genetic Variation; Horses/*genetics; Male; Pedigree; RNA, Ribosomal/*genetics |
| Abstract |
Variation in the control region and the 12S rRNA gene of all surviving mitochondrial lineages of Przewalski's horse was investigated. Variation is low despite the present day population being descended from 13 individuals probably representing animals from three different regions of its range. Phylogenetic comparison of these sequences, with sequences for the domestic horse, does not resolve the ancestral status of either horse. |
| Address |
Center for Reproduction of Endangered Species, Zoological Society of San Diego, CA 92112, USA |
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English |
Summary Language |
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Edition |
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0268-9146 |
ISBN |
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Conference |
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| Notes |
PMID:9883508 |
Approved |
no |
| Call Number |
Equine Behaviour @ team @ |
Serial |
5040 |
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| Author |
Chilton, N.B. |
| Title |
The use of nuclear ribosomal DNA markers for the identification of bursate nematodes (order Strongylida) and for the diagnosis of infections |
Type |
Journal Article |
| Year |
2004 |
Publication |
Animal Health Research Reviews / Conference of Research Workers in Animal Diseases |
Abbreviated Journal |
Anim Health Res Rev |
| Volume |
5 |
Issue |
2 |
Pages |
173-187 |
| Keywords |
Animals; Birds; Cats; DNA Primers; DNA, Helminth/*analysis; DNA, Ribosomal/*analysis; Dogs; Horses; Molecular Diagnostic Techniques/veterinary; Ruminants; Strongylida/*genetics; Strongylida Infections/diagnosis/*veterinary |
| Abstract |
Many bursate nematodes are of major importance to animal health. Animals are often parasitized by multiple species that differ in their prevalence, relative abundance and/or pathogenicity. Implementation of effective management strategies for these parasites requires reliable methods for their detection in hosts, identification to the species level and measurement of intensity of infection. One major problem is the difficulty of accurately identifying and distinguishing many species of bursate nematode because of the remarkable morphological similarity of their eggs and larvae. The inability to identify, with confidence, individual nematodes (irrespective of their life-cycle stage) to the species level by morphological methods has often led to a search for species-specific genetic markers. Studies over the past 15 years have shown that sequences of the internal transcribed spacers of ribosomal DNA provide useful genetic markers, providing the basis for the development of PCR-based diagnostic tools. Such molecular methods represent powerful tools for studying the systematics, epidemiology and ecology of bursate nematodes and, importantly, for the specific diagnosis of infections in animals and humans, thus contributing to improved control and prevention strategies for these parasites. |
| Address |
Department of Biology, University of Saskatchewan, 112 Science Place, Saskatoon, Saskatchewan S7N 5E2, Canada. neil.chilton@usask.ca |
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English |
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Series Issue |
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Edition |
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| ISSN |
1466-2523 |
ISBN |
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Conference |
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| Notes |
PMID:15984323 |
Approved |
no |
| Call Number |
Equine Behaviour @ team @ |
Serial |
2628 |
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| Author |
Burke, D.; Cieplucha, C.; Cass, J.; Russell, F.; Fry, G. |
| Title |
Win-shift and win-stay learning in the short-beaked echidna (Tachyglossus aculeatus) |
Type |
Journal Article |
| Year |
2002 |
Publication |
Animal Cognition |
Abbreviated Journal |
Anim. Cogn. |
| Volume |
5 |
Issue |
2 |
Pages |
79-84 |
| Keywords |
Animals; Echidna/*psychology; Ecology; Female; *Learning; *Memory; *Predatory Behavior; Reinforcement (Psychology) |
| Abstract |
Numerous previous investigators have explained species differences in spatial memory performance in terms of differences in foraging ecology. In three experiments we attempted to extend these findings by examining the extent to which the spatial memory performance of echidnas (or “spiny anteaters”) can be understood in terms of the spatio-temporal distribution of their prey (ants and termites). This is a species and a foraging situation that have not been examined in this way before. Echidnas were better able to learn to avoid a previously rewarding location (to “win-shift”) than to learn to return to a previously rewarding location (to “win-stay”), at short retention intervals, but were unable to learn either of these strategies at retention intervals of 90 min. The short retention interval results support the ecological hypothesis, but the long retention interval results do not. |
| Address |
Department of Psychology, University of Wollongong, Wollongong, NSW 2522, Australia. darren_burke@uow.edu.au |
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English |
Summary Language |
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Abbreviated Series Title |
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Edition |
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| ISSN |
1435-9448 |
ISBN |
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Conference |
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| Notes |
PMID:12150039 |
Approved |
no |
| Call Number |
Equine Behaviour @ team @ |
Serial |
2605 |
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| Author |
Muscatello, G.; Anderson, G.A.; Gilkerson, J.R.; Browning, G.F. |
| Title |
Associations between the ecology of virulent Rhodococcus equi and the epidemiology of R. equi pneumonia on Australian thoroughbred farms |
Type |
Journal Article |
| Year |
2006 |
Publication |
Applied and Environmental Microbiology |
Abbreviated Journal |
Appl Environ Microbiol |
| Volume |
72 |
Issue |
9 |
Pages |
6152-6160 |
| Keywords |
Actinomycetales Infections/epidemiology/microbiology/*veterinary; Air Microbiology; Animal Husbandry; Animals; Animals, Newborn; Australia/epidemiology; Colony Count, Microbial; DNA, Bacterial/genetics; Ecosystem; Horse Diseases/epidemiology/*microbiology; Horses; Pneumonia, Bacterial/epidemiology/microbiology/*veterinary; Rhodococcus equi/genetics/isolation & purification/*pathogenicity; Soil Microbiology; Virulence |
| Abstract |
The ecology of virulent strains of Rhodococcus equi on horse farms is likely to influence the prevalence and severity of R. equi pneumonia in foals. This study examined the association between the ecology of virulent R. equi and the epidemiology of R. equi pneumonia by collecting air and soil samples over two breeding seasons (28 farm-year combinations) on Thoroughbred breeding farms with different reported prevalences of R. equi pneumonia. Colony blotting and DNA hybridization were used to detect and measure concentrations of virulent R. equi. The prevalence of R. equi pneumonia was associated with the airborne burden of virulent R. equi (both the concentration and the proportion of R. equi bacteria that were virulent) but was not associated with the burden of virulent R. equi in the soil. Univariable screening and multivariable model building were used to evaluate the effect of environmental and management factors on virulent R. equi burdens. Lower soil moisture concentrations and lower pasture heights were significantly associated with elevated airborne concentrations of virulent R. equi, as were the holding pens and lanes, which typically were sandy, dry, and devoid of pasture cover. Few variables appeared to influence concentrations of virulent R. equi in soil. Acidic soil conditions may have contributed to an elevated proportion of virulent strains within the R. equi population. Environmental management strategies that aim to reduce the level of exposure of susceptible foals to airborne virulent R. equi are most likely to reduce the impact of R. equi pneumonia on endemically affected farms. |
| Address |
School of Veterinary Science, The University of Melbourne, Parkville, Victoria 3010, Australia. mug@unimelb.edu.au |
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English |
Summary Language |
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Abbreviated Series Title |
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Series Issue |
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Edition |
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| ISSN |
0099-2240 |
ISBN |
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| Notes |
PMID:16957241 |
Approved |
no |
| Call Number |
Equine Behaviour @ team @ |
Serial |
2622 |
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| Author |
Feh, C.; Munkhtuya, B. |
| Title |
Male infanticide and paternity analyses in a socially natural herd of Przewalski`s horses: Sexual selection? |
Type |
Journal Article |
| Year |
2008 |
Publication |
Behavioural Processes |
Abbreviated Journal |
Behav. Process. |
| Volume |
78 |
Issue |
3 |
Pages |
335-339 |
| Keywords |
DNA paternity analysis; Human disturbance; Male infanticide; Przewalski's horse (Equus ferus przewalskii); Sexual selection |
| Abstract |
The sexual selection hypothesis explains infanticide by males in many mammals. In our 11-year study, we investigated this hypothesis in a herd of Przewalski's horses where we had witnessed infanticidal attacks. Infanticide was highly conditional and not simply linked to takeovers. Attacks occurred in only five of 39 cases following a takeover, and DNA paternity revealed that, although infanticidal stallions were not the genetic fathers in four cases out of five, stallions present at birth did not significantly attempt to kill unrelated foals. Infanticide did not reduce birth intervals; only in one case out of five was the infanticidal stallion, the father of the next foal; mothers whose foals were attacked subsequently avoided associating with infanticidal stallions. Therefore, evidence for the sexual selection hypothesis was weak. The “human disturbance” hypothesis received some support, as only zoo bred stallions which grew up in unnatural social groups attacked foals of mares which were pregnant during takeovers. |
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Equine Behaviour @ team @ |
Serial |
4632 |
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