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Murphy, M. A., Waits, L. P., Kendall, K. C., Wasser, S. K., Higbee, J. A., & Bogden, R. (2002). An evaluation of long-term preservation methods for brown bear (Ursus arctos) faecal DNA samples. Conservat. Genet., 3(4), 435–440.
Abstract: Relatively few large-scale faecal DNA studieshave been initiated due to difficulties inamplifying low quality and quantity DNAtemplate. To improve brown bear faecal DNA PCRamplification success rates and to determinepost collection sample longevity, fivepreservation methods were evaluated: 90%ethanol, DETs buffer, silica-dried, oven-driedstored at room temperature, and oven-driedstored at -20 °C. Preservationeffectiveness was evaluated for 50 faecalsamples by PCR amplification of a mitochondrialDNA (mtDNA) locus (~146 bp) and a nuclear DNA(nDNA) locus (~200 bp) at time points of oneweek, one month, three months and six months. Preservation method and storage timesignificantly impacted mtDNA and nDNAamplification success rates. For mtDNA, allpreservation methods had >= 75% success atone week, but storage time had a significantimpact on the effectiveness of the silicapreservation method. Ethanol preserved sampleshad the highest success rates for both mtDNA(86.5%) and nDNA (84%). Nuclear DNAamplification success rates ranged from 26-88%, and storage time had a significant impacton all methods but ethanol. Preservationmethod and storage time should be importantconsiderations for researchers planningprojects utilizing faecal DNA. We recommendpreservation of faecal samples in 90% ethanolwhen feasible, although when collecting inremote field conditions or for both DNA andhormone assays a dry collection method may beadvantageous.
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Wasser, S. K., Keim, J. L., Taper, M. L., & Lele, S. R. (2011). The influences of wolf predation, habitat loss, and human activity on caribou and moose in the Alberta oil sands. Frontiers in Ecology and the Environment, .
Abstract: Woodland caribou (Rangifer tarandus caribou) and moose (Alces alces) populations in the Alberta oil sands region of western Canada are influenced by wolf (Canis lupus) predation, habitat degradation and loss, and anthropogenic activities. Trained domestic dogs were used to locate scat from caribou, moose, and wolves during winter surges in petroleum development. Evidence obtained from collected scat was then used to estimate resource selection, measure physiological stress, and provide individual genetic identification for precise mark–recapture abundance estimates of caribou, moose, and wolves. Strong impacts of human activity were indicated by changes in resource selection and in stress and nutrition hormone levels as human-use measures were added to base resource selection models (including ecological variables, provincial highways, and pre-existing linear features with no human activity) for caribou. Wolf predation and resource selection so heavily targeted deer (Odocoileus virginiana or O hemionus) that wolves appeared drawn away from prime caribou habitat. None of the three examined species showed a significant population change over 4 years. However, caribou population estimates were more than double those of previous approximations for this area. Our findings suggest that modifying landscape-level human-use patterns may be more effective at managing this ecosystem than intentional removal of wolves.
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