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Author  |
Abbruzzetti, S.; Viappiani, C.; Sinibaldi, F.; Santucci, R. |
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Title |
Kinetics of histidine dissociation from the heme Fe(III) in N-fragment (residues 1-56) of cytochrome c |
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Journal Article |
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Year |
2004 |
Publication |
The Protein Journal |
Abbreviated Journal |
Protein J |
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Volume |
23 |
Issue |
8 |
Pages |
519-527 |
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Keywords |
Animals; Cytochromes c/*chemistry; Enzyme Activation; Histidine/*chemistry; Horses; Hydrogen-Ion Concentration; Kinetics; Lasers; Ligands; Peptide Mapping; Photolysis; Spectrophotometry |
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Abstract |
We have here investigated the dissociation kinetics of the His side chains axially ligated to the heme-iron in the ferric (1-56 residues) N-fragment of horse cyt c. The ligand deligation induced by acidic pH-jump occurs as a biexponential process with different pre-exponential factors, consistent with a structural heterogeneity in solution and the presence of two differently coordinated species. In analogy with GuHCl-denatured cyt c, our data indicate the presence in solution of two ferric forms of the N-fragment characterized by bis-His coordination, as summarized in the following scheme: His18-Fe(III)-His26 <==> His18-Fe(III)-His33. We have found that the pre-exponential factors depend on the extent of the pH-jump. This may be correlated with the different pKa values shown by His26 and His33; due to steric factors, His26 binds to the heme-Fe(III) less strongly than His33, as recently shown by studies on denatured cyt c. Interestingly, the two lifetimes are affected by temperature but not by the extent of the pH-jump. The lower pKa for the deligation reaction required the use of an improved laser pH-jump setup, capable of inducing changes in H+ concentration as large as 1 mM after the end of the laser pulse. For the ferric N-fragment, close activation entropy values have been determined for the two histidines coordinated to the iron; this result significantly differs from that for GuHCl-denatured cyt c, where largely different values of activation entropy were calculated. This underlines the role played by the missing segment (residues 57-104) peptide chain in discriminating deligation of the “nonnative” His from the sixth coordination position of the metal. |
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Dipartimento di Fisica, Universita degli Studi di Parma, Parco Area delle Scienze 7/A 43100 Parma, Italy |
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1572-3887 |
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PMID:15648974 |
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Equine Behaviour @ team @ |
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3770 |
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Author |
Aberle, K.S.; Hamann, H.; Drögemüller, C.; Distl, O. |
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Title |
Genetic diversity in German draught horse breeds compared with a group of primitive, riding and wild horses by means of microsatellite DNA markers |
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Journal Article |
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Year |
2004 |
Publication |
Animal Genetics |
Abbreviated Journal |
Anim. Gen. |
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Volume |
35 |
Issue |
4 |
Pages |
270-277 |
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Keywords |
diversity; endangered breeds; genetic variation; horse; microsatellite |
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Summary We compared the genetic diversity and distance among six German draught horse breeds to wild (Przewalski's Horse), primitive (Icelandic Horse, Sorraia Horse, Exmoor Pony) or riding horse breeds (Hanoverian Warmblood, Arabian) by means of genotypic information from 30 microsatellite loci. The draught horse breeds included the South German Coldblood, Rhenish German Draught Horse, Mecklenburg Coldblood, Saxon Thuringa Coldblood, Black Forest Horse and Schleswig Draught Horse. Despite large differences in population sizes, the average observed heterozygosity (Ho) differed little among the heavy horse breeds (0.64�0.71), but was considerably lower than in the Hanoverian Warmblood or Icelandic Horse population. The mean number of alleles (NA) decreased more markedly with declining population sizes of German draught horse breeds (5.2�6.3) but did not reach the values of Hanoverian Warmblood (NA = 6.7). The coefficient of differentiation among the heavy horse breeds showed 11.6% of the diversity between the heavy horse breeds, as opposed to 21.2% between the other horse populations. The differentiation test revealed highly significant genetic differences among all draught horse breeds except the Mecklenburg and Saxon Thuringa Coldbloods. The Schleswig Draught Horse was the most distinct draught horse breed. In conclusion, the study demonstrated a clear distinction among the German draught horse breeds and even among breeds with a very short history of divergence like Rhenish German Draught Horse and its East German subpopulations Mecklenburg and Saxon Thuringa Coldblood. |
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Blackwell Science Ltd |
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1365-2052 |
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Equine Behaviour @ team @ |
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5184 |
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Author |
Allcroft, D. J.; Tolkamp, B. J.; Glasbey, C. A.; Kyriazakis, I. |
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Title |
The importance of `memory' in statistical models for animal feeding behaviour |
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Journal Article |
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Year |
2004 |
Publication |
Behavioural Processes |
Abbreviated Journal |
Behav. Process. |
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Volume |
67 |
Issue |
1 |
Pages |
99-109 |
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Keywords |
Cow; Feeding data; Bouts; Memory; Satiety; Latent structure; Model comparison |
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We investigate models for animal feeding behaviour, with the aim of improving understanding of how animals organise their behaviour in the short term. We consider three classes of model: hidden Markov, latent Gaussian and semi-Markov. Each can predict the typical `clustered' feeding behaviour that is generally observed, however they differ in the extent to which `memory' of previous behaviour is allowed to affect future behaviour. The hidden Markov model has `lack of memory', the current behavioural state being dependent on the previous state only. The latent Gaussian model assumes feeding/non-feeding periods to occur by the thresholding of an underlying continuous variable, thereby incorporating some `short-term memory'. The semi-Markov model, by taking into account the duration of time spent in the previous state, can be said to incorporate `longer-term memory'. We fit each of these models to a dataset of cow feeding behaviour. We find the semi-Markov model (longer-term memory) to have the best fit to the data and the hidden Markov model (lack of memory) the worst. We argue that in view of effects of satiety on short-term feeding behaviour of animal species in general, biologically suitable models should allow `memory' to play a role. We conclude that our findings are equally relevant for the analysis of other types of short-term behaviour that are governed by satiety-like principles. |
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Equine Behaviour @ team @ |
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2350 |
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Author |
Anderson, J.R.; Kuroshima, H.; Kuwahata, H.; Fujita, K. |
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Title |
Do squirrel monkeys (Saimiri sciureus) and capuchin monkeys (Cebus apella) predict that looking leads to touching? |
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Journal Article |
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Year |
2004 |
Publication |
Animal Cognition |
Abbreviated Journal |
Anim. Cogn. |
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7 |
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3 |
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185-192 |
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Animals; Association Learning; *Attention; Cebus/*psychology; Cognition; *Concept Formation; Cues; Fixation, Ocular; Humans; *Nonverbal Communication; Recognition (Psychology); Saimiri/*psychology; Social Behavior; Species Specificity |
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Squirrel monkeys (Saimiri sciureus) and capuchin monkeys (Cebus apella) were tested using an expectancy violation procedure to assess whether they use an actor's gaze direction, signaled by congruent head and eye orientation, to predict subsequent behavior. The monkeys visually habituated to a repeated sequence in which the actor (a familiar human or a puppet) looked at an object and then picked it up, but they did not react strongly when the actor looked at an object but then picked up another object. Capuchin monkeys' responses in the puppet condition were slightly more suggestive of expectancy. There was no differential responding to congruent versus incongruent look-touch sequences when familiarization trials were omitted. The weak findings contrast with a strongly positive result previously reported for tamarin monkeys. Additional evidence is required before concluding that behavior prediction based on gaze cues typifies primates; other approaches for studying how they process attention cues are indicated. |
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Department of Psychology, University of Stirling, FK9 4LA, Stirling, Scotland. jra1@stir.ac.uk |
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1435-9448 |
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PMID:15022054 |
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Equine Behaviour @ team @ |
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2540 |
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Author |
Anderson, T.M.; McIlwraith, C.W.; Douay, P. |
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Title |
The role of conformation in musculoskeletal problems in the racing Thoroughbred |
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Journal Article |
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Year |
2004 |
Publication |
Equine Veterinary Journal |
Abbreviated Journal |
Equine Vet J |
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36 |
Issue |
7 |
Pages |
571-575 |
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Animals; Carpus, Animal/anatomy & histology/physiology; Horse Diseases/etiology/*pathology/surgery; Horses/*anatomy & histology/injuries/physiology; Likelihood Functions; Logistic Models; Muscle, Skeletal/*anatomy & histology/pathology; Musculoskeletal Diseases/pathology/surgery/*veterinary; Tarsus, Animal/anatomy & histology/physiology; Treatment Outcome |
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REASONS FOR PERFORMING STUDY: The relationship of conformation to future potential injury is a standard approach in practise but, at present, is largely based on subjective observations. OBJECTIVE: To measure conformation in 3-year-old Thoroughbreds and objectively test its relationship with the occurrence of musculoskeletal problems. METHODS: Conformation measurements were taken from photographs using specific reference points marked on the horses and processed on the computer. Clinical observations were recorded for each horse on a regular basis. Stepwise (forward) logistic regression analysis was performed to investigate the relationship between the binary response of the clinical outcomes probability and the conformation variables by the method of maximum likelihood. RESULTS: Clinical outcomes significantly (P<0.05) associated with conformational variables included effusion of the front fetlock, effusion of the right carpus, effusion of the carpus, effusion of the hind fetlock, fracture of the left or right carpus, right front fetlock problem and hind fetlock problem. CONCLUSIONS: Offset knees (offset ratio) contributed to fetlock problems. Long pasterns increased the odds of a fracture in the front limb. An increase in the carpal angle as viewed from the front (carpal valgus) may serve as a protective mechanism, as the odds for a carpal fracture and carpal effusion decreased with an increase in the carpal angle. POTENTIAL RELEVANCE: This study demonstrates relationships between conformation and musculoskeletal disease in the racehorse. The information may be useful in selection and management of the racing Thoroughbred. |
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Colorado State University, Equine Science and Equine Orthopaedic Research Programs, Fort Collins, Colorado 80523, USA |
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0425-1644 |
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PMID:15581320 |
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Equine Behaviour @ team @ |
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3697 |
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Author |
Apollonio, M.; Mattioli, L.; Scandura, M.; Mauri, L.; Gazzola, A.; Avanzinelli, E. |
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Wolves in the Casentinesi Forests: insights for wolf conservation in Italy from a protected area with a rich wild prey community |
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2004 |
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Biol Conserv |
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120 |
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Equine Behaviour @ team @ Apollonio2004 |
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6475 |
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Author |
Arluke, A. |
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The use of dogs in medical and veterinary training: understanding and approaching student uneasiness |
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Journal Article |
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2004 |
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Journal of Applied Animal Welfare Science : JAAWS |
Abbreviated Journal |
J Appl Anim Welf Sci |
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7 |
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3 |
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197-204 |
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*Animal Experimentation; Animals; *Animals, Laboratory; Cadaver; Comprehension; Dogs; Education, Veterinary/*ethics/*methods; Humans; Massachusetts; Schools, Veterinary; Students, Medical/*psychology; Biomedical and Behavioral Research |
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Tajen Institute of Technology, Taiwan. a.arluke@neu.edu |
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1088-8705 |
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PMID:15498727; KIE: KIE Bib: animal experimentation |
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Equine Behaviour @ team @ |
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2755 |
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Artzy-Randrup, Y.; Fleishman, S.J.; Ben-Tal, N.; Stone, L. |
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Comment on “Network Motifs: Simple Building Blocks of Complex Networks” and “Superfamilies of Evolved and Designed Networks” |
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2004 |
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Science |
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Science |
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305 |
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5687 |
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1107c |
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10.1126/science.1099334 |
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Equine Behaviour @ team @ |
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5037 |
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Author |
Assersohn, C.; Whiten, A.; Kiwede, Z.T.; Tinka, J.; Karamagi, J. |
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Use of leaves to inspect ectoparasites in wild chimpanzees: a third cultural variant? |
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Year |
2004 |
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Primates |
Abbreviated Journal |
Primates |
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45 |
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4 |
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255-258 |
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Animals; Animals, Wild/physiology; Ape Diseases/*parasitology; Behavior, Animal/*physiology; Ectoparasitic Infestations/parasitology/*veterinary; Female; Grooming/*physiology; Male; Pan troglodytes/*physiology; *Plant Leaves; Protozoa/*isolation & purification; Uganda |
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We report 26 cases of using leaves as tools with which wild chimpanzees (Pan troglodytes schweinfurthii) in the Sonso community, Budongo Forest, Uganda, appeared to inspect objects removed during grooming. Careful removal of potential ectoparasites and delicate lip or manual placement on leaves followed by intense visual examination characterised this behaviour. It appears to be done to judge whether either ingestion or discarding is most appropriate, the former occurring in most cases. This behaviour may represent a third variant of ectoparasite handling, different from those described at Tai and Gombe, yet sharing features with the latter. These two East African techniques may thus have evolved from leaf grooming. |
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Scottish Primate Research Group, School of Psychology, University of St Andrews, St Andrews, KY16 9JU, Fife, UK |
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0032-8332 |
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PMID:15179558 |
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refbase @ user @ |
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733 |
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Baldi, R.; Pelliza-Sbriller, A.; Elston, D.; Albon, S. |
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Title |
High Potential For Competition Between Guanacos And Sheep In Patagonia |
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Journal Article |
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2004 |
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Journal of Wildlife Management |
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68 |
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4 |
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924-938 |
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Guanacos (Lama guanicoe) are the largest native Artiodactyl in South America and the most widely distributed. In arid Patagonia, densities are low and negatively related to domestic sheep numbers in space and time consistent with interspecific competition theory. Although guanacos and domestic sheep have been described as intermediate feeders sharing food resources, no studies have been conducted to compare their diets in sympatric conditions and explore whether the potential exists for direct interspecific competition. We assessed the diet of both species across 9 different sites and 2 seasons by microhistological analysis of fecal samples. We found that (1) guanacos and sheep are generalist herbivores feeding on a wide range of plant species; (2) both are intermediate feeders able to include both monocotyledoneous and dicotyledoneous plants in their diet; (3) both are able to change their diets seasonally; and (4) food niche overlap is high, particularly in summer when food resources are more scarce than in spring. We conclude that the potential for competition between guanacos and sheep is high and could have played a major role in the demise of guanacos. Consequently, current management practices focused on maximizing sheep numbers are not compatible with the recovery of guanaco populations. |
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Equine Behaviour @ team @ |
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4253 |
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