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	Author	Jansen, T.; Forster, P.; Levine, M.A.; Oelke, H.; Hurles, M.; Renfrew, C.; Weber, J.; Olek, K.
	Title	Mitochondrial DNA and the origins of the domestic horse			Type	Journal Article
	Year	2002	Publication	Proceedings of the National Academy of Sciences of the United States of America	Abbreviated Journal	Proc. Natl. Acad. Sci. U.S.A.
	Volume	99	Issue	16	Pages	10905-10910
	Keywords	Animals; Animals, Domestic/classification/genetics; Base Sequence; DNA, Complementary; DNA, Mitochondrial; Evolution, Molecular; Horses/classification/genetics; Molecular Sequence Data; Phylogeny
	Abstract	The place and date of the domestication of the horse has long been a matter for debate among archaeologists. To determine whether horses were domesticated from one or several ancestral horse populations, we sequenced the mitochondrial D-loop for 318 horses from 25 oriental and European breeds, including American mustangs. Adding these sequences to previously published data, the total comes to 652, the largest currently available database. From these sequences, a phylogenetic network was constructed that showed that most of the 93 different mitochondrial (mt)DNA types grouped into 17 distinct phylogenetic clusters. Several of the clusters correspond to breeds and/or geographic areas, notably cluster A2, which is specific to Przewalski's horses, cluster C1, which is distinctive for northern European ponies, and cluster D1, which is well represented in Iberian and northwest African breeds. A consideration of the horse mtDNA mutation rate together with the archaeological timeframe for domestication requires at least 77 successfully breeding mares recruited from the wild. The extensive genetic diversity of these 77 ancestral mares leads us to conclude that several distinct horse populations were involved in the domestication of the horse.
	Address	Biopsytec Analytik GmbH, Marie-Curie-Strasse 1, 53359 Rheinbach, Germany. jansen@biopsytec.com
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0027-8424	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:12130666			Approved	no
	Call Number	refbase @ user @			Serial	772
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	Author	Haruta, N.; Kitagawa, T.
	Title	Time-resolved UV resonance Raman investigation of protein folding using a rapid mixer: characterization of kinetic folding intermediates of apomyoglobin			Type	Journal Article
	Year	2002	Publication	Biochemistry	Abbreviated Journal	Biochemistry
	Volume	41	Issue	21	Pages	6595-6604
	Keywords	Animals; Apoproteins/chemistry; Circular Dichroism; Holoenzymes/chemistry; Horses; Hydrochloric Acid/chemistry; Hydrogen-Ion Concentration; Imidazoles/chemistry; Kinetics; Models, Molecular; Myoglobin/chemistry; Peptide Fragments/chemistry; Protein Folding; Protein Structure, Secondary; Spectrum Analysis, Raman/methods; Tryptophan/*chemistry; Ultraviolet Rays; Whales
	Abstract	The 244-nm excited transient UV resonance Raman spectra are observed for the refolding intermediates of horse apomyoglobin (h-apoMb) with a newly constructed mixed flow cell system, and the results are interpreted on the basis of the spectra observed for the equilibrium acid unfolding of the same protein. The dead time of mixing, which was determined with the appearance of UV Raman bands of imidazolium upon mixing of imidazole with acid, was 150 micros under the flow rate that was adopted. The pH-jump experiments of h-apoMb from pH 2.2 to 5.6 conducted with this device demonstrated the presence of three folding intermediates. On the basis of the analysis of W3 and W7 bands of Trp7 and Trp14, the first intermediate, formed before 250 micros, involved incorporation of Trp14 into the alpha-helix from a random coil. The frequency shift of the W3 band of Trp14 observed for this process was reproduced with a model peptide of the A helix when it forms the alpha-helix. In the second intermediate, formed around 1 ms after the start of refolding, the surroundings of both Trp7 and Trp14 were significantly hydrophobic, suggesting the formation of the hydrophobic core. In the third intermediate appearing around 3 ms, the hydrophobicity was relaxed to the same level as that of the pH 4 equilibrium intermediate, which was investigated in detail with the stationary state technique. The change from the third intermediate to the native state needs more time than 40 ms, while the appearance of the native spectrum after the mixing of the same solutions was confirmed separately.
	Address	School of Mathematical and Physical Sciences, The Graduate University for Advanced Studies, Myodaiji, Okazaki 444-8585, Japan
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0006-2960	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:12022863			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	3785
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	Author	Chase, I.D.; Tovey, C.; Spangler-Martin, D.; Manfredonia, M.
	Title	Individual differences versus social dynamics in the formation of animal dominance hierarchies			Type	Journal Article
	Year	2002	Publication	Proceedings of the National Academy of Sciences of the United States of America	Abbreviated Journal	Proc. Natl. Acad. Sci. U.S.A.
	Volume	99	Issue	8	Pages	5744-5749
	Keywords	Animals; Behavior, Animal; Fishes; Humans; Social Behavior; *Social Dominance
	Abstract	Linear hierarchies, the classical pecking-order structures, are formed readily in both nature and the laboratory in a great range of species including humans. However, the probability of getting linear structures by chance alone is quite low. In this paper we investigate the two hypotheses that are proposed most often to explain linear hierarchies: they are predetermined by differences in the attributes of animals, or they are produced by the dynamics of social interaction, i.e., they are self-organizing. We evaluate these hypotheses using cichlid fish as model animals, and although differences in attributes play a significant part, we find that social interaction is necessary for high proportions of groups with linear hierarchies. Our results suggest that dominance hierarchy formation is a much richer and more complex phenomenon than previously thought, and we explore the implications of these results for evolutionary biology, the social sciences, and the use of animal models in understanding human social organization.
	Address	Department of Sociology, State University of New York, Stony Brook, NY 11794-4356, USA. Ichase@notes.cc.sunysb.edu
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0027-8424	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:11960030			Approved	no
	Call Number	refbase @ user @			Serial	442
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	Author	Reader, S.M.; Laland, K.N.
	Title	Social intelligence, innovation, and enhanced brain size in primates			Type	Journal Article
	Year	2002	Publication	Proceedings of the National Academy of Sciences of the United States of America	Abbreviated Journal	Proc. Natl. Acad. Sci. U.S.A.
	Volume	99	Issue	7	Pages	4436-4441
	Keywords	Animals; Brain/anatomy & histology; Evolution; Intelligence; Learning; Primates/anatomy & histology/psychology; Social Behavior
	Abstract	Despite considerable current interest in the evolution of intelligence, the intuitively appealing notion that brain volume and “intelligence” are linked remains untested. Here, we use ecologically relevant measures of cognitive ability, the reported incidence of behavioral innovation, social learning, and tool use, to show that brain size and cognitive capacity are indeed correlated. A comparative analysis of 533 instances of innovation, 445 observations of social learning, and 607 episodes of tool use established that social learning, innovation, and tool use frequencies are positively correlated with species' relative and absolute “executive” brain volumes, after controlling for phylogeny and research effort. Moreover, innovation and social learning frequencies covary across species, in conflict with the view that there is an evolutionary tradeoff between reliance on individual experience and social cues. These findings provide an empirical link between behavioral innovation, social learning capacities, and brain size in mammals. The ability to learn from others, invent new behaviors, and use tools may have played pivotal roles in primate brain evolution.
	Address	Department of Zoology, University of Cambridge, High Street, Madingley, Cambridge CB3 8AA, United Kingdom
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0027-8424	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:11891325			Approved	no
	Call Number				Serial	2149
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	Author	Seyfarth, R.M.; Cheney, D.L.
	Title	What are big brains for?			Type	Journal Article
	Year	2002	Publication	Proceedings of the National Academy of Sciences of the United States of America	Abbreviated Journal	Proc. Natl. Acad. Sci. U.S.A.
	Volume	99	Issue	7	Pages	4141-4142
	Keywords	Animals; Brain/anatomy & histology; Intelligence; Learning; Primates/anatomy & histology/psychology; Social Behavior
	Abstract
	Address	Department of Psychology, University of Pennsylvania, Philadelphia, PA 19104, USA. seyfarth@psych.upenn.edu
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0027-8424	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:11929989			Approved	no
	Call Number	refbase @ user @			Serial	692
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	Author	Ginther, O.J.; Lara, A.; Leoni, M.; Bergfelt, D.R.
	Title	Herding and snaking by the harem stallion in domestic herds			Type	Journal Article
	Year	2002	Publication	Theriogenology	Abbreviated Journal
	Volume	57	Issue	8	Pages	2139-2146
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	Cited By (since 1996): 1; Export Date: 21 October 2008			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	4516
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	Author	Peake, T.M.; Terry, A.M.R.; McGregor, P.K.; Dabelsteen, T.
	Title	Do great tits assess rivals by combining direct experience with information gathered by eavesdropping?			Type	Journal Article
	Year	2002	Publication	Proceedings. Biological sciences / The Royal Society	Abbreviated Journal	Proc Biol Sci
	Volume	269	Issue	1503	Pages	1925-1929
	Keywords	Aggression; Animal Communication; Animals; Male; Songbirds/physiology; Territoriality; *Vocalization, Animal
	Abstract	Animals frequently use signals that travel further than the spacing between individuals. For every intended recipient of a given signal there are likely to be many other individuals that receive information. Eavesdropping on signalling interactions between other individuals provides a relatively cost-free method of assessing future opponents or mates. Male great tits (Parus major) extract relative information from such interactions between individuals unknown to them. Here, we show that male great tits can take information gathering a stage further and obtain more information about a previously unencountered intruder, by the hitherto unknown capability of combining information gathered by eavesdropping with that derived from their own direct interaction with an individual. Prior experience with an intruder (A) was achieved by subjecting a focal male to different levels of intrusion simulated using interactive playback. This intruder (A) then took part in a simulated interaction with an unknown male (B) outside the territorial boundary of the focal males. In response to subsequent intrusion by the second male (B), focal males showed low song output in response to males that had lost to a male that the subject was able to beat. Males of known high quality, or those about which information was ambiguous, elicited a high level of song output by focal males. We discuss the implications of this finding for the evolution of communication and social behaviour.
	Address	Department of Animal Behaviour, Zoological Institute, Copenhagen University, Tagensvej 16, DK 2200 Copenhagen N, Denmark. tmpeake@zi.ku.uk
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	0962-8452	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:12350255			Approved	no
	Call Number	refbase @ user @			Serial	501
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	Author	Bracke, M.B.M.; Spruijt, B.M.; Metz, J.H.M.; Schouten, W.G.P.
	Title	Decision support system for overall welfare assessment in pregnant sows A: Model structure and weighting procedure			Type	Journal Article
	Year	2002	Publication	Journal of Animal Science	Abbreviated Journal	J. Anim Sci.
	Volume	80	Issue	7	Pages	1819-1834
	Keywords
	Abstract	The problem of how to objectively assess the overall welfare status of animals under farming conditions has contributed to an ongoing debate that has hampered actual decision making on animal welfare. For this reason we constructed a model based on the assumed hierarchical organization of the animals' needs for overall welfare assessment in the case of pregnant sows. This model is implemented in a computer-based decision support system that takes a description of a housing and management system as input and produces a welfare score as output. A formalized procedure was used to construct the model for welfare assessment in pregnant sows on the basis of available scientific knowledge. This SOWEL (from SOw WELfare) model contains 37 attributes that describe the welfare-relevant properties of housing and management systems. In the decision support system these attributes are linked to scientific statements and a list of needs to provide a scientific basis for welfare assessment. Weighting factors that represent the relative importance of the attributes are derived from the scientific statements about the various welfare performance criteria that have been measured by scientists. The welfare score is calculated as the weighted average score. All information in the decision support system is stored in tables in a relational database such that newly available knowledge and insights can be incorporated to refine the model. The model has been developed in line with several existing models but it differs from these models in that it is the first to provide a formalized procedure to explicate the reasoning steps involved in welfare assessment based on available scientific knowledge. N1 -
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes				Approved	no
	Call Number	Equine Behaviour @ team @			Serial	2943
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	Author	Hare, B.; Brown, M.; Williamson, C.; Tomasello, M.
	Title	The domestication of social cognition in dogs			Type	Journal Article
	Year	2002	Publication	Science (New York, N.Y.)	Abbreviated Journal	Science
	Volume	298	Issue	5598	Pages	1634-1636
	Keywords	Animals; Animals, Domestic; Behavior, Animal; Cognition; Cues; Dogs; Food; Humans; Memory; Pan troglodytes; Social Behavior; Species Specificity; Vision; Wolves
	Abstract	Dogs are more skillful than great apes at a number of tasks in which they must read human communicative signals indicating the location of hidden food. In this study, we found that wolves who were raised by humans do not show these same skills, whereas domestic dog puppies only a few weeks old, even those that have had little human contact, do show these skills. These findings suggest that during the process of domestication, dogs have been selected for a set of social-cognitive abilities that enable them to communicate with humans in unique ways.
	Address	Department of Anthropology, Harvard University, Cambridge, MA 02138, USA. bhare@fas.harvard.edu
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language	English	Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1095-9203	ISBN		Medium
	Area		Expedition		Conference
	Notes	PMID:12446914			Approved	no
	Call Number	refbase @ user @			Serial	595
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	Author	Giraldeau, Luc-Alain; Valone, Thomas, J.; Templeton, Jennifer, J.
	Title	Potential disadvantages of using socially acquired information			Type	Journal Article
	Year	2002	Publication	Philosophical Transactions of the Royal Society B: Biological Sciences	Abbreviated Journal	Phil. Trans. Biol. Sci.
	Volume	357	Issue	1427	Pages	1559-1566
	Keywords	Public Information Informational Cascades Social Learning Sampling
	Abstract	The acquisition and use of socially acquired information is commonly assumed to be profitable. We challenge this assumption by exploring hypothetical scenarios where the use of such information either provides no benefit or can actually be costly. First, we show that the level of incompatibility between the acquisition of personal and socially acquired information will directly affect the extent to which the use of socially acquired information can be profitable. When these two sources of information cannot be acquired simultaneously, there may be no benefit to socially acquired information. Second, we assume that a solitary individual's behavioural decisions will be based on cues revealed by its own interactions with the environment. However, in many cases, for social animals the only socially acquired information available to individuals is the behavioural actions of others that expose their decisions, rather than the cues on which these decisions were based. We argue that in such a situation the use of socially acquired information can lead to informational cascades that sometimes result in sub-optimal behaviour. From this theory of informational cascades, we predict that when erroneous cascades are costly, individuals should pay attention only to socially generated cues and not behavioural decisions. We suggest three scenarios that might be examples of informational cascades in nature.
	Address
	Corporate Author				Thesis
	Publisher		Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
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	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes				Approved	no
	Call Number	Equine Behaviour @ team @			Serial	4197
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