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Murphy, M.A.; Waits, L.P.; Kendall, K.C.; Wasser, S.K.; Higbee, J.A.; Bogden, R. |
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Title  |
An evaluation of long-term preservation methods for brown bear (Ursus arctos) faecal DNA samples |
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Journal Article |
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2002 |
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Conservation Genetics |
Abbreviated Journal |
Conservat. Genet. |
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3 |
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4 |
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435-440 |
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Relatively few large-scale faecal DNA studieshave been initiated due to difficulties inamplifying low quality and quantity DNAtemplate. To improve brown bear faecal DNA PCRamplification success rates and to determinepost collection sample longevity, fivepreservation methods were evaluated: 90%ethanol, DETs buffer, silica-dried, oven-driedstored at room temperature, and oven-driedstored at -20 °C. Preservationeffectiveness was evaluated for 50 faecalsamples by PCR amplification of a mitochondrialDNA (mtDNA) locus (~146 bp) and a nuclear DNA(nDNA) locus (~200 bp) at time points of oneweek, one month, three months and six months. Preservation method and storage timesignificantly impacted mtDNA and nDNAamplification success rates. For mtDNA, allpreservation methods had >= 75% success atone week, but storage time had a significantimpact on the effectiveness of the silicapreservation method. Ethanol preserved sampleshad the highest success rates for both mtDNA(86.5%) and nDNA (84%). Nuclear DNAamplification success rates ranged from 26-88%, and storage time had a significant impacton all methods but ethanol. Preservationmethod and storage time should be importantconsiderations for researchers planningprojects utilizing faecal DNA. We recommendpreservation of faecal samples in 90% ethanolwhen feasible, although when collecting inremote field conditions or for both DNA andhormone assays a dry collection method may beadvantageous. |
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1572-9737 |
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Equine Behaviour @ team @ Murphy2002 |
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6574 |
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Gaunitz, C.; Fages, A.; Hanghøj, K.; Albrechtsen, A.; Khan, N.; Schubert, M.; Seguin-Orlando, A.; Owens, I.J.; Felkel, S.; Bignon-Lau, O.; de Barros Damgaard, P.; Mittnik, A.; Mohaseb, A.F.; Davoudi, H.; Alquraishi, S.; Alfarhan, A.H.; Al-Rasheid, K.A.S.; Crubézy, E.; Benecke, N.; Olsen, S.; Brown, D.; Anthony, D.; Massy, K.; Pitulko, V.; Kasparov, A.; Brem, G.; Hofreiter, M.; Mukhtarova, G.; Baimukhanov, N.; Lõugas, L.; Onar, V.; Stockhammer, P.W.; Krause, J.; Boldgiv, B.; Undrakhbold, S.; Erdenebaatar, D.; Lepetz, S.; Mashkour, M.; Ludwig, A.; Wallner, B.; Merz, V.; Merz, I.; Zaibert, V.; Willerslev, E.; Librado, P.; Outram, A.K.; Orlando, L. |
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Title |
Ancient genomes revisit the ancestry of domestic and Przewalski's horses |
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2018 |
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Science |
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360 |
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6384 |
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111-114 |
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The Eneolithic Botai culture of the Central Asian steppes provides the earliest archaeological evidence for horse husbandry, ~5,500 ya, but the exact nature of early horse domestication remains controversial. We generated 42 ancient horse genomes, including 20 from Botai. Compared to 46 published ancient and modern horse genomes, our data indicate that Przewalski's horses are the feral descendants of horses herded at Botai and not truly wild horses. All domestic horses dated from ~4,000 ya to present only show ~2.7% of Botai-related ancestry. This indicates that a massive genomic turnover underpins the expansion of the horse stock that gave rise to modern domesticates, which coincides with large-scale human population expansions during the Early Bronze Age. |
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Admin @ knut @ |
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6212 |
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Animal Acoustic Communication: Sound Analysis and Research Methods |
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1998 |
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Springer |
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Berlin |
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Equine Behaviour @ team @ ref56 |
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6497 |
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Krueger, K.; Esch, L.; Byrne, R. |
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Animal behaviour in a human world: A crowdsourcing study on horses that open door and gate mechanisms |
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2019 |
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Plos One |
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Plos One |
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14 |
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6 |
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e0218954 |
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Anecdotal reports of horses opening fastened doors and gates are an intriguing way of exploring the possible scope of horses' problem-solving capacities. The species' natural environment has no analogues of the mechanisms involved. Scientific studies on the topic are missing, because the rate of occurrence is too low for exploration under controlled conditions. Therefore, we compiled from lay persons case reports of horses opening closed doors and gates. Additionally, we collected video documentations at the internet platform YouTube, taking care to select raw data footage of unedited, clearly described and clearly visible cases of animals with no distinct signs of training or reduced welfare. The data included individuals opening 513 doors or gates on hinges, 49 sliding doors, and 33 barred doors and gateways; mechanisms included 260 cases of horizontal and 155 vertical bars, 43 twist locks, 42 door handles, 34 electric fence handles, 40 carabiners, and 2 locks with keys. Opening was usually for escape, but also for access to food or stable-mates, or out of curiosity or playfulness. While 56 percent of the horses opened a single mechanism at one location, 44 percent opened several types of mechanism (median = 2, min. = 1, max. = 5) at different locations (median = 2, min. = 1, max. = 4). The more complex the mechanism was, the more movements were applied, varying from median 2 for door handles to 10 for carabiners. Mechanisms requiring head- or lip-twisting needed more movements, with significant variation between individuals. 74 horses reported in the questionnaire had options for observing the behaviour in stable mates, 183 did not, which indicates that the latter learned to open doors and gates either individually or from observing humans. Experience favours opening efficiency; subjects which opened several door types applied fewer movements per lock than horses which opened only one door type. We failed to identify a level of complexity of door-fastening mechanism that was beyond the learning capacity of the horse to open. Thus, all devices in frequent use, even carabiners and electric fence handles, are potentially vulnerable to opening by horses, something which needs to be considered in relation to keeping horses safely. |
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Public Library of Science |
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Equine Behaviour @ team @ |
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6580 |
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Griffin, A.S.; Tebbich, S.; Bugnyar, T. |
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Animal cognition in a human-dominated world |
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2017 |
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Animal Cognition |
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Anim. Cogn. |
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20 |
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1 |
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1-6 |
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In the USA, each year, up to one billion birds are estimated to die from colliding with windowpanes (Sabo et al. 2016). A further 573,000 are struck down by wind turbines, along with 888,000 bats (Smallwood 2013). Worldwide, unintended capture in fishing devices is recognized as the single most serious global threat to migratory, long-lived marine taxa including turtles, birds, mammals and sharks (Wallace et al. 2013). Estimates put the number of amphibians killed per year on Australian roads at 5 million (Seiler 2003). The likelihood of a green turtle erroneously ingesting plastic debris, often by mistaking them for food, rose from 30% in 1985 to almost 50% in 2012 (Schuyler et al. 2013). Human-induced rapid environmental change (HIREC, sensu Sih et al. 2011) is filling animals’ environments with new threats which bear little or excessive similarity to those they have encountered in their evolutionary history (Dwernychuk and Boag 1972; Patten and Kelley 2010; Witherington 1997). As a consequence, many of the stimuli involved fall outside the adaptive processing space of animals’ evolutionary perceptual, learning, memory and decision-making systems, making individuals particularly vulnerable to their impact. |
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1435-9456 |
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Equine Behaviour @ team @ Griffin2017 |
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6129 |
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Reader, S.M.; Laland, K.N. |
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Animal Innovation |
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2009 |
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Oxford University Press |
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Oxford |
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978-0-19-852622 |
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Equine Behaviour @ team @ |
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6381 |
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Reader, S. M.; Laland, K.N. |
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Animal Innovation |
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2003 |
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Oxford University Press |
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Oxford |
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Equine Behaviour @ team @ |
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6531 |
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Bergmüller, R.; Taborsky, M. |
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Animal personality due to social niche specialisation |
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2010 |
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Trends in Ecology & Evolution |
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25 |
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9 |
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504-511 |
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The existence of 'animal personality', i.e. consistent individual differences in behaviour across time and contexts, is an evolutionary puzzle that has recently generated considerable research interest. Although social factors are generally considered to be important, it is as yet unclear how they might select for personality. Drawing from ecological niche theory, we explore how social conflict and alternative social options can be key factors in the evolution and development of consistent individual differences in behaviour. We discuss how animal personality research might benefit from insights into the study of alternative tactics and illustrate how selection can favour behavioural diversification and consistency due to fitness benefits resulting from conflict reduction among social partners. |
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0169-5347 |
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Equine Behaviour @ team @ |
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6646 |
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Beck, B. B. |
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Animal tool behaviour: The use and manufacture of tools by animals |
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1980 |
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Garland |
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New York |
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Equine Behaviour @ team @ |
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6524 |
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Bentley-Condit, V.; Smith, E.O. |
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Animal tool use: current definitions and an updated comprehensive catalog |
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2010 |
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Behaviour |
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147 |
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2 |
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185-32 |
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TOOL USE; CATALOG; ANIMAL |
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Despite numerous attempts to define animal tool use over the past four decades, the definition remains elusive and the behaviour classification somewhat subjective. Here, we provide a brief review of the definitions of animal tool use and show how those definitions have been modified over time. While some aspects have remained constant (i.e., the distinction between 'true' and 'borderline' tool use), others have been added (i.e., the distinction between 'dynamic' and 'static' behaviours). We present an updated, comprehensive catalog of documented animal tool use that indicates whether the behaviours observed included any 'true' tool use, whether the observations were limited to captive animals, whether tool manufacture has been observed, and whether the observed tool use was limited to only one individual and, thus, 'anecdotal' (i.e., N = 1). Such a catalog has not been attempted since Beck (1980). In addition to being a useful reference for behaviourists, this catalog demonstrates broad tool use and manufacture trends that may be of interest to phylogenists, evolutionary ecologists, and cognitive evolutionists. Tool use and tool manufacture are shown to be widespread across three phyla and seven classes of the animal kingdom. Moreover, there is complete overlap between the Aves and Mammalia orders in terms of the tool use categories (e.g., food extraction, food capture, agonism) arguing against any special abilities of mammals. The majority of tool users, almost 85% of the entries, use tools in only one of the tool use categories. Only members of the Passeriformes and Primates orders have been observed to use tools in four or more of the ten categories. Thus, observed tool use by some members of these two orders (e.g., Corvus, Papio) is qualitatively different from that of all other animal taxa. Finally, although there are similarities between Aves and Mammalia, and Primates and Passeriformes, primate tool use is qualitatively different. Approximately 35% of the entries for this order demonstrate a breadth of tool use (i.e., three or more categories by any one species) compared to other mammals (0%), Aves (2.4%), and the Passeriformes (3.1%). This greater breadth in tool use by some organisms may involve phylogenetic or cognitive differences � or may simply reflect differences in length and intensity of observations. The impact that tool usage may have had on groups' respective ecological niches and, through niche-construction, on their respective evolutionary trajectories remains a subject for future study. |
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Equine Behaviour @ team @ :/content/journals/10.1163/000579509x12512865686555 |
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5859 |
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