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Author |
Cilnis, M.J.; Kang, W.; Weaver, S.C. |
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Title |
Genetic conservation of Highlands J viruses |
Type |
Journal Article |
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Year |
1996 |
Publication |
Virology |
Abbreviated Journal |
Virology |
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Volume |
218 |
Issue |
2 |
Pages |
343-351 |
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Keywords |
Alphavirus/*genetics; Alphavirus Infections/transmission/veterinary/virology; Amino Acid Sequence; Animals; Base Sequence; Conserved Sequence; Disease Outbreaks; Encephalitis, Viral/veterinary/virology; *Evolution, Molecular; Horses; Molecular Sequence Data; Phylogeny; RNA, Viral/genetics; Sequence Alignment; Sequence Analysis, DNA; Sequence Homology, Nucleic Acid; Turkeys; Variation (Genetics)/*genetics |
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Abstract |
We studied molecular evolution of the mosquito-borne alphavirus Highlands J (HJ) virus by sequencing PCR products generated from 19 strains isolated between 1952 and 1994. Sequences of 1200 nucleotides including portions of the E1 gene and the 3' untranslated region revealed a relatively slow evolutionary rate estimated at 0.9-1.6 x 10(-4) substitutions per nucleotide per year. Phylogenetic trees indicated that all HJ viruses descended from a common ancestor and suggested the presence of one dominant lineage in North America. However, two or more minor lineages probably circulated simultaneously for periods of years to a few decades. Strains isolated from a horse suffering encephalitis, and implicated in a recent turkey outbreak, were not phylogenetically distinct from strains isolated in other locations during the same time periods. Our findings are remarkably similar to those we obtained previously for another North American alphavirus, eastern equine encephalomyelitis virus, with which Highlands J shares primary mosquito and avian hosts, geographical distribution, and ecology. These results support the hypotheses that the duration of the transmission season affects arboviral evolutionary rates and vertebrate host mobility influences genetic diversity. |
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Department of Biology, University of California, San Diego, La Jolla 92093-0116, USA |
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0042-6822 |
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PMID:8610461 |
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no |
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Call Number |
Equine Behaviour @ team @ |
Serial |
2657 |
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Author |
Cooper, M.A.; Bernstein, I.S. |
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Title |
Counter aggression and reconciliation in Assamese macaques (Macaca assamensis) |
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Journal Article |
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Year |
2002 |
Publication |
American journal of primatology |
Abbreviated Journal |
Am. J. Primatol. |
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Volume |
56 |
Issue |
4 |
Pages |
215-230 |
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Keywords |
*Aggression; Animals; Female; *Macaca; Male; Phylogeny; Sex Factors; *Social Behavior; Social Dominance |
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Abstract |
Patterns of aggressive and affiliative behavior, such as counter aggression and reconciliation, are said to covary in the genus Macaca; this is referred to as the systematic variation hypothesis. These behavior patterns constitute a species dominance style. Van Schaik's [1989] socioecological model explains dominance style in macaques in terms of within- and between-group contest competition. Dominance style is also said to correlate with phylogeny in macaques. The present study was undertaken to examine phylogenetic and socioecological explanations of dominance style, as well as the systematic variation hypothesis. We collected data on counter aggression and reconciliation from a habituated group of Assamese macaques (Macaca assamensis) at the Tukeswari Temple in Assam, India. The proportion of agonistic episodes that involved counter aggression was relatively low. Counter aggression, however, occurred more often among males than among females, and it was most common when females initiated aggression against males. The conciliatory tendency for this group of Assamese macaques was 11.2%. The frequency of reconciliation was low for fights among males and for fights among females, but reconciliation was particularly rare for opposite-sexed opponents. Female social relationships were consistent with the systematic variation hypothesis, and suggest a despotic dominance style. A despotic dominance style in Assamese macaques weakens the correlation between dominance style and phylogeny in macaques, but it is not inconsistent with the socioecological model. Male-female relationships were not well explained by the despotic-egalitarian framework, and males may well have more tolerant social relationships than do females. Sex differences need to be considered when categorizing species according to dominance style. |
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Department of Psychology, University of Georgia, Athens, Georgia, USA. biomcc@langate.gsu.edu |
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0275-2565 |
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PMID:11948638 |
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refbase @ user @ |
Serial |
2877 |
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Author |
Dugatkin, L.A. |
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Title |
Animal cooperation among unrelated individuals |
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Journal Article |
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Year |
2002 |
Publication |
Die Naturwissenschaften |
Abbreviated Journal |
Naturwissenschaften |
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Volume |
89 |
Issue |
12 |
Pages |
533-541 |
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Keywords |
Animals; Phylogeny; *Social Behavior; Species Specificity |
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Abstract |
The evolution of cooperation has long been a topic near and dear to the hearts of behavioral and evolutionary ecologists. Cooperative behaviors run the gamut from fairly simple to very complicated and there are a myriad of ways to study cooperation. Here I shall focus on three paths that have been delineated in the study of intraspecific cooperation among unrelated individuals: reciprocity, byproduct mutualism, and group selection. In each case, I attempt to delineate the theory underlying each of these paths and then provide examples from the empirical literature. In addition, I shall briefly touch upon some recent work that has attempted to examine (or re-examine) the role of cognition and phylogeny in the study of cooperative behavior. While empirical and theoretical work has made significant strides in the name of better understanding the evolution and maintenance of cooperative behavior in animals, much work remains for the future. “From the point of view of the moralist, the animal world is on about the same level as the gladiator's show. The creatures are fairly well treated, and set to fight; whereby the strongest, the swiftest and the cunningest live to fight another day. The spectator has no need to turn his thumb down, as no quarter is given em leader the weakest and the stupidest went to the wall, while the toughest and the shrewdest, those who were best fitted to cope with their circumstances, but not the best in any other way, survived. Life was a continuous free fight, and em leader a war of each against all was the normal state of existence.” (Huxley 1888) |
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Department of Biology, University of Louisville, Louisville, KY 40292, USA. lee.dugatkin@louisville.edu |
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0028-1042 |
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PMID:12536274 |
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Call Number |
Equine Behaviour @ team @ |
Serial |
2797 |
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Author |
Duncan, I.J.H. |
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Title |
D.G.M. Wood-Gush Memorial Lecture: An applied ethologist looks at the question “Why?” |
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Journal Article |
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Year |
1995 |
Publication |
Applied Animal Behaviour Science |
Abbreviated Journal |
Appl. Anim. Behav. Sci. |
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Volume |
44 |
Issue |
2-4 |
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205-217 |
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Causation; Cognition; Function; Future research; Ontogeny; Phylogeny; States of suffering; Welfare |
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Abstract |
The question “Why does an animal behave as it does?” can be answered in terms of ontogeny, function, phylogeny and causation. The achievements of applied ethology relative to those four approaches are reviewed, gaps in our knowledge are identified and predictions for fruitful avenues of future research are made. Ontogenic studies have been useful in the past and it is suggested that studies of the effects of early experience on the sexual behaviour of animals used in artificial breeding schemes might pay dividends. It is proposed that functional studies should be approached cautiously. More information is required on the process of domestication in order to increase the chances of success in the trend to farm exotic species. Studies on causation are likely to continue to be the mainstay of applied ethological research. It is suggested that within this category, studies on states of suffering, motivation and cognition are urgently required to answer the most pressing questions on animal welfare. |
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Equine Behaviour @ team @ |
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2919 |
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Author |
Fenton, B.; Ratcliffe, J. |
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Title |
Animal behaviour: eavesdropping on bats |
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Journal Article |
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Year |
2004 |
Publication |
Nature |
Abbreviated Journal |
Nature |
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Volume |
429 |
Issue |
6992 |
Pages |
612-613 |
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Keywords |
Acoustics; Animals; Chiroptera/anatomy & histology/classification/genetics/*physiology; Echolocation/*physiology; *Evolution; Phylogeny; Predatory Behavior/physiology; Species Specificity |
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1476-4687 |
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PMID:15190335 |
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refbase @ user @ |
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500 |
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Author |
Gallup, G.G.J. |
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Title |
On the rise and fall of self-conception in primates |
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Journal Article |
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Year |
1997 |
Publication |
Annals of the New York Academy of Sciences |
Abbreviated Journal |
Ann N Y Acad Sci |
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818 |
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72-82 |
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Keywords |
Animals; Phylogeny; Primates/*psychology; *Self Concept |
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Department of Psychology, State University of New York at Albany 12222, USA |
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0077-8923 |
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PMID:9237466 |
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Equine Behaviour @ team @ |
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4134 |
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Author |
Hauser, M.D.; Kralik, J.; Botto-Mahan, C.; Garrett, M.; Oser, J. |
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Title |
Self-recognition in primates: phylogeny and the salience of species-typical features |
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Journal Article |
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Year |
1995 |
Publication |
Proceedings of the National Academy of Sciences of the United States of America |
Abbreviated Journal |
Proc. Natl. Acad. Sci. U.S.A. |
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Volume |
92 |
Issue |
23 |
Pages |
10811-10814 |
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Keywords |
Animals; *Behavior, Animal; *Cognition; Discrimination (Psychology); Exploratory Behavior; Female; Hair Color; Male; Phylogeny; Psychology, Comparative; Research Design; Saguinus/*psychology; *Self Concept; Species Specificity; Touch; *Visual Perception |
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Abstract |
Self-recognition has been explored in nonlinguistic organisms by recording whether individuals touch a dye-marked area on visually inaccessible parts of their face while looking in a mirror or inspect parts of their body while using the mirror's reflection. Only chimpanzees, gorillas, orangutans, and humans over the age of approximately 2 years consistently evidence self-directed mirror-guided behavior without experimenter training. To evaluate the inferred phylogenetic gap between hominoids and other animals, a modified dye-mark test was conducted with cotton-top tamarins (Saguinus oedipus), a New World monkey species. The white hair on the tamarins' head was color-dyed, thereby significantly altering a visually distinctive species-typical feature. Only individuals with dyed hair and prior mirror exposure touched their head while looking in the mirror. They looked longer in the mirror than controls, and some individuals used the mirror to observe visually inaccessible body parts. Prior failures to pass the mirror test may have been due to methodological problems, rather than to phylogenetic differences in the capacity for self-recognition. Specifically, an individual's sensitivity to experimentally modified parts of its body may depend crucially on the relative saliency of the modified part (e.g., face versus hair). Moreover, and in contrast to previous claims, we suggest that the mirror test may not be sufficient for assessing the concept of self or mental state attribution in nonlinguistic organisms. |
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Department of Anthropology, Harvard University, Cambridge, MA 02138, USA |
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0027-8424 |
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PMID:7479889 |
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Call Number |
Equine Behaviour @ team @ |
Serial |
2825 |
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Author |
Ishida, N.; Oyunsuren, T.; Mashima, S.; Mukoyama, H.; Saitou, N. |
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Title |
Mitochondrial DNA sequences of various species of the genus Equus with special reference to the phylogenetic relationship between Przewalskii's wild horse and domestic horse |
Type |
Journal Article |
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Year |
1995 |
Publication |
Journal of Molecular Evolution |
Abbreviated Journal |
J Mol Evol |
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Volume |
41 |
Issue |
2 |
Pages |
180-188 |
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Keywords |
Animals; Base Sequence; Chromosomes; Conserved Sequence/genetics; DNA, Mitochondrial/*genetics; Evolution; Genetic Variation/*genetics; Horses/*genetics; Molecular Sequence Data; *Phylogeny; RNA, Transfer, Pro/genetics; Sequence Alignment; Sequence Analysis, DNA |
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Abstract |
The noncoding region between tRNAPro and the large conserved sequence block is the most variable region in the mammalian mitochondrial DNA D-loop region. This variable region (ca. 270 bp) of four species of Equus, including Mongolian and Japanese native domestic horses as well as Przewalskii's (or Mongolian) wild horse, were sequenced. These data were compared with our recently published Thoroughbred horse mitochondrial DNA sequences. The evolutionary rate of this region among the four species of Equus was estimated to be 2-4 x 10(-8) per site per year. Phylogenetic trees of Equus species demonstrate that Przewalskii's wild horse is within the genetic variation among the domestic horse. This suggests that the chromosome number change (probably increase) of the Przewalskii's wild horse occurred rather recently. |
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Address |
Laboratory of Molecular and Cellular Biology, Japan Racing Association, Tokyo |
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0022-2844 |
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PMID:7666447 |
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Equine Behaviour @ team @ |
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5042 |
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Author |
Jansen, T.; Forster, P.; Levine, M.A.; Oelke, H.; Hurles, M.; Renfrew, C.; Weber, J.; Olek, K. |
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Title |
Mitochondrial DNA and the origins of the domestic horse |
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Journal Article |
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Year |
2002 |
Publication |
Proceedings of the National Academy of Sciences of the United States of America |
Abbreviated Journal |
Proc. Natl. Acad. Sci. U.S.A. |
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Volume |
99 |
Issue |
16 |
Pages |
10905-10910 |
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Keywords |
Animals; Animals, Domestic/classification/*genetics; Base Sequence; DNA, Complementary; *DNA, Mitochondrial; *Evolution, Molecular; Horses/classification/*genetics; Molecular Sequence Data; Phylogeny |
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Abstract |
The place and date of the domestication of the horse has long been a matter for debate among archaeologists. To determine whether horses were domesticated from one or several ancestral horse populations, we sequenced the mitochondrial D-loop for 318 horses from 25 oriental and European breeds, including American mustangs. Adding these sequences to previously published data, the total comes to 652, the largest currently available database. From these sequences, a phylogenetic network was constructed that showed that most of the 93 different mitochondrial (mt)DNA types grouped into 17 distinct phylogenetic clusters. Several of the clusters correspond to breeds and/or geographic areas, notably cluster A2, which is specific to Przewalski's horses, cluster C1, which is distinctive for northern European ponies, and cluster D1, which is well represented in Iberian and northwest African breeds. A consideration of the horse mtDNA mutation rate together with the archaeological timeframe for domestication requires at least 77 successfully breeding mares recruited from the wild. The extensive genetic diversity of these 77 ancestral mares leads us to conclude that several distinct horse populations were involved in the domestication of the horse. |
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Biopsytec Analytik GmbH, Marie-Curie-Strasse 1, 53359 Rheinbach, Germany. jansen@biopsytec.com |
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0027-8424 |
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PMID:12130666 |
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refbase @ user @ |
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772 |
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Author |
Linklater, W.L. |
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Title |
Adaptive explanation in socio-ecology: lessons from the Equidae |
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Journal Article |
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Year |
2000 |
Publication |
Biological Reviews of the Cambridge Philosophical Society |
Abbreviated Journal |
Biol. Rev. |
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Volume |
75 |
Issue |
1 |
Pages |
1-20 |
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*Adaptation, Physiological; Animals; Ecology; Equidae/*physiology; Female; Male; Phylogeny |
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Abstract |
Socio-ecological explanations for intra- and interspecific variation in the social and spatial organization of animals predominate in the scientific literature. The socio-ecological model, developed first for the Bovidae and Cervidae, is commonly applied more widely to other groups including the Equidae. Intraspecific comparisons are particularly valuable because they allow the role of environment and demography on social and spatial organization to be understood while controlling for phylogeny or morphology which confound interspecific comparisons. Feral horse (Equus caballus Linnaeus 1758) populations with different demography inhabit a range of environments throughout the world. I use 56 reports to obtain 23 measures or characteristics of the behaviour and the social and spatial organization of 19 feral horse populations in which the environment, demography, management, research effort and sample size are also described. Comparison shows that different populations had remarkably similar social and spatial organization and that group sizes and composition, and home range sizes varied as much within as between populations. I assess the few exceptions to uniformity and conclude that they are due to the attributes of the studies themselves, particularly to poor definition of terms and inadequate empiricism, rather than to the environment or demography per se. Interspecific comparisons show that equid species adhere to their different social and spatial organizations despite similarities in their environments and even when species are sympatric. Furthermore, equid male territoriality has been ill-defined in previous studies, observations presented as evidence of territoriality are also found in non-territorial equids, and populations of supposedly territorial species demonstrate female defence polygyny. Thus, territoriality may not be a useful categorization in the Equidae. Moreover, although equid socio-ecologists have relied on the socio-ecological model derived from the extremely diverse Bovidae and Cervidae for explanations of variation in equine society, the homomorphic, but large and polygynous, and monogeneric Equidae do not support previous socio-ecological explanations for relationships between body size, mating system and sexual dimorphism in ungulates. Consequently, in spite of the efforts of numerous authors during the past two decades, functional explanations of apparent differences in feral horse and equid social and spatial organization and behaviour based on assumptions of their current utility in the environmental or demographic context remain unconvincing. Nevertheless, differences in social cohesion between species that are insensitive to intra- and interspecific variation in habitat and predation pressure warrant explanation. Thus, I propose alternative avenues of inquiry including testing for species-specific differences in inter-individual aggression and investigating the role of phylogenetic constraints in equine society. The Equidae are evidence of the relative importance of phylogeny and biological structure, and unimportance of the present-day environment, in animal behaviour and social and spatial organization. |
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Institute of Natural Resources, Massey University, Palmerston North, New Zealand |
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1464-7931 |
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PMID:10740891 |
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2024 |
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