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Author Haruta, N.; Kitagawa, T.
Title Time-resolved UV resonance Raman investigation of protein folding using a rapid mixer: characterization of kinetic folding intermediates of apomyoglobin Type Journal Article
Year (up) 2002 Publication Biochemistry Abbreviated Journal Biochemistry
Volume 41 Issue 21 Pages 6595-6604
Keywords Animals; Apoproteins/*chemistry; Circular Dichroism; Holoenzymes/chemistry; Horses; Hydrochloric Acid/chemistry; Hydrogen-Ion Concentration; Imidazoles/chemistry; Kinetics; Models, Molecular; Myoglobin/*chemistry; Peptide Fragments/chemistry; *Protein Folding; Protein Structure, Secondary; Spectrum Analysis, Raman/*methods; Tryptophan/*chemistry; Ultraviolet Rays; Whales
Abstract The 244-nm excited transient UV resonance Raman spectra are observed for the refolding intermediates of horse apomyoglobin (h-apoMb) with a newly constructed mixed flow cell system, and the results are interpreted on the basis of the spectra observed for the equilibrium acid unfolding of the same protein. The dead time of mixing, which was determined with the appearance of UV Raman bands of imidazolium upon mixing of imidazole with acid, was 150 micros under the flow rate that was adopted. The pH-jump experiments of h-apoMb from pH 2.2 to 5.6 conducted with this device demonstrated the presence of three folding intermediates. On the basis of the analysis of W3 and W7 bands of Trp7 and Trp14, the first intermediate, formed before 250 micros, involved incorporation of Trp14 into the alpha-helix from a random coil. The frequency shift of the W3 band of Trp14 observed for this process was reproduced with a model peptide of the A helix when it forms the alpha-helix. In the second intermediate, formed around 1 ms after the start of refolding, the surroundings of both Trp7 and Trp14 were significantly hydrophobic, suggesting the formation of the hydrophobic core. In the third intermediate appearing around 3 ms, the hydrophobicity was relaxed to the same level as that of the pH 4 equilibrium intermediate, which was investigated in detail with the stationary state technique. The change from the third intermediate to the native state needs more time than 40 ms, while the appearance of the native spectrum after the mixing of the same solutions was confirmed separately.
Address School of Mathematical and Physical Sciences, The Graduate University for Advanced Studies, Myodaiji, Okazaki 444-8585, Japan
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0006-2960 ISBN Medium
Area Expedition Conference
Notes PMID:12022863 Approved no
Call Number Equine Behaviour @ team @ Serial 3785
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Author Griffin, B.
Title The use of fecal markers to facilitate sample collection in group-housed cats Type Journal Article
Year (up) 2002 Publication Contemporary Topics in Laboratory Animal Science / American Association for Laboratory Animal Science Abbreviated Journal Contemp Top Lab Anim Sci
Volume 41 Issue 2 Pages 51-56
Keywords Animals; Behavior, Animal; Biological Markers/*analysis; Cats/*physiology/psychology; Diet/veterinary; Feces/*chemistry; Food Coloring Agents/analysis; Housing, Animal; Individuality; Plastics/analysis; Specimen Handling/methods/*veterinary
Abstract The provision of proper social housing is a priority when designing an experiment using domestic cats as laboratory animals. When animals are group-housed, studies requiring analysis of stool samples from individual subjects pose difficulty in sample collection and identification. In this study, commercially available concentrated food colorings (known as bakers pastes) were used as fecal markers in group-housed cats. Cats readily consumed 0.5 ml of bakers paste food coloring once daily in canned cat food. Colorings served as fecal markers by imparting a distinct color to each cat s feces, allowing identification in the litter box. In addition, colored glitter (1/8 teaspoon in canned food) was fed to cats and found to be a reliable fecal marker. Long-term feeding of colorings and glitter was found to be safe and effective at yielding readily identifiable stools.
Address Scott-Ritchey Research Center, College of Veterinary Medicine, Auburn University, Alabama 36841, USA
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1060-0558 ISBN Medium
Area Expedition Conference
Notes PMID:11958604 Approved no
Call Number Equine Behaviour @ team @ Serial 4165
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Author Nicol, C.J.; Potzsch, C.; Lewis, K.; Green, L.E.
Title Matched concurrent case-control study of risk factors for feather pecking in hens on free-range commercial farms in the UK Type Journal Article
Year (up) 2003 Publication British poultry science Abbreviated Journal Br Poult Sci
Volume 44 Issue 4 Pages 515-523
Keywords *Aggression; Analysis of Variance; Animal Husbandry/methods; Animals; Case-Control Studies; Chickens/*physiology; Feathers; Female; Multivariate Analysis; Odds Ratio; Regression Analysis; Species Specificity
Abstract 1. The aim of the study was to compare the management and husbandry of free-range flocks in the UK where feather pecking was either present (case) or absent (control). 2. One hundred flocks were enrolled into a concurrent case-control study: 50 where birds had recently started feather pecking, and 50 matched control flocks where birds of the same age had not started feather pecking. 3. Information was obtained from a detailed interview with the flock manager, and by direct inspection of the flock, house and range. 4. Initial univariate analyses revealed that case flocks were more likely to comprise ISA Brown than Lohmann, were more likely to be restricted from litter areas to prevent floor eggs, and were less likely to use the outside range. 5. Cluster analysis indicated that feather pecking was not associated with any particular husbandry system. 6. The only influential risk factor significant in the multivariable conditional logistic regression analysis was use of the outdoor range. The risk of feather pecking was reduced 9-fold in flocks where more than 20% of birds used the range on sunny days (odds ratio = 0.12). Use of the range was positively associated with the presence of trees and/or hedges on the range.
Address Department of Clinical Veterinary Science, University of Bristol, England. c.j.nicol@bris.ac.uk
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0007-1668 ISBN Medium
Area Expedition Conference
Notes PMID:14584840 Approved no
Call Number refbase @ user @ Serial 79
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Author Kirkpatrick, J.F.; Turner, A.
Title Absence of effects from immunocontraception on seasonal birth patterns and foal survival among barrier island wild horses Type Journal Article
Year (up) 2003 Publication Journal of applied animal welfare science : JAAWS Abbreviated Journal J Appl Anim Welf Sci
Volume 6 Issue 4 Pages 301-308
Keywords Animals; Animals, Newborn; Animals, Wild/*physiology; Birth Rate; Case-Control Studies; Contraception, Immunologic/methods/*veterinary; Egg Proteins/administration & dosage; Female; Horses/*physiology; Maryland/epidemiology; Membrane Glycoproteins/administration & dosage; Population Control; Pregnancy; *Receptors, Cell Surface; *Reproduction; Seasons; Vaccines, Contraceptive/administration & dosage
Abstract Despite a large body of safety data, concern exists that porcine zonae pellucidae (PZP) immunocontraception--used to manage wild horse populations--may cause out-of-season births with resulting foal mortality. Our study at Assateague, Maryland indicated the effects of immunocontraception on season of birth and foal survival between 1990 and 2002 on wild horses from Assateague Island. Among 91 mares never treated, 69 (75.8%) of foals were born in April, May, and June (in season). Among 77 treated mares, 50 (64.9%) were born in season. Of 29 mares foaling within 1 year after treatment (contraceptive failures), 20 (68.9%) were born in season. Of 48 mares treated for greater than 2 years then withdrawn from treatment, 30 (62.5%) of 48 foals were born in season. There were no significant differences (p <.05) between either treatment group or untreated mares. Survival did not differ significantly among foals born in or out of season or among foals born to treated or untreated mares. Data indicate a lack of effect of PZP contraception on season of birth or foal survival on barrier island habitats.
Address Science and Conservation Center Zoo Montana, Billings, Montana 59106, USA. jkirkpatrick@montana.net
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1088-8705 ISBN Medium
Area Expedition Conference
Notes PMID:14965784 Approved no
Call Number refbase @ user @ Serial 140
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Author Zentall, T.R.; Clement, T.S.; Weaver, J.E.
Title Symmetry training in pigeons can produce functional equivalences Type Journal Article
Year (up) 2003 Publication Psychonomic bulletin & review Abbreviated Journal Psychon Bull Rev
Volume 10 Issue 2 Pages 387-391
Keywords Animals; Association; Behavior, Animal; Columbidae; Conditioning (Psychology)/*physiology; Teaching/*methods; *Transfer (Psychology)
Abstract Functional stimulus equivalence has been demonstrated using a transfer of training design with matching-to-sample training in which two sample stimuli are associated with the same comparison stimulus (A-B, C-B; many-to-one matching). Equivalence is shown by training a new association (A-D) and demonstrating the presence of an emergent relation (C-D). In the present experiment, we show that symmetry training, in which a bidirectional association is trained between two stimuli (A-B, B-A, using successive stimulus presentations followed by reinforcement), can also produce functional equivalence using a transfer of training design (i.e., train B-C, test A-C). The results suggest that training pigeons in the substitutability of two stimuli may be sufficient to produce functional stimulus equivalence between them. The results also have implications for the development of an emergent transitive relation, because training on A-B and B-C relations results in the emergence of an untrained A-C relation, if B-A training also is provided.
Address Department of Psychology, University of Kentucky, Lexington, Kentucky 40506-0044, USA. zentall@pop.uky.edu
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 1069-9384 ISBN Medium
Area Expedition Conference
Notes PMID:12921414 Approved no
Call Number refbase @ user @ Serial 235
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Author Bachmann, I.; Audige, L.; Stauffacher, M.
Title Risk factors associated with behavioural disorders of crib-biting, weaving and box-walking in Swiss horses Type Journal Article
Year (up) 2003 Publication Equine Veterinary Journal Abbreviated Journal Equine Vet J
Volume 35 Issue 2 Pages 158-163
Keywords Animal Husbandry/*methods; Animals; *Behavior, Animal; Confounding Factors (Epidemiology); Data Collection; Female; Horse Diseases/epidemiology/*etiology/prevention & control; Horses; *Housing, Animal; Male; Mental Disorders/epidemiology/etiology/prevention & control/*veterinary; Prevalence; Regression Analysis; Risk Factors; *Stereotyped Behavior; Switzerland/epidemiology
Abstract REASONS FOR PERFORMING STUDY: Studies on the prevalence of behavioural disorders in horses and on associated risk factors have revealed inconsistent results. There are many studies on the neuropharmacological, surgical or mechanical therapy of stereotypies, but little is known about their causation. OBJECTIVES: To explore risk factors associated with the occurrence of behavioural disorders in horses. METHODS: A sample of horse owners, selected randomly and representative for Switzerland, was contacted in a postal survey. Answers were provided for 622 stables (response rate 35.2%). Individual data of 2,341 horses were examined with path analysis (multivariable linear and logistic regression), and adjustment made for possible confounding effects due to age and breed. RESULTS: Out of 60 possible risk factors, 11 were associated with the outcome at the univariable level (null-hypothesis path model) and 3 factors remained after the backward logistic regression procedure. Mature Warmbloods and Thoroughbreds, assessed by the owners to be reactive, fed 4 times a day and without daily pasture, had increased odds of displaying crib-biting, weaving and box-walking. Furthermore, indirect associations of 5 factors with the outcome were identified. CONCLUSIONS: The final logistic regression model of risk factors leads to the hypotheses that causal prevention of stereotypic behaviours should be based upon housing and management conditions which allow tactile contact with other horses (e.g. mutual grooming), daily free movement (paddock or pasture), as well as the provision of high amounts of roughage but of little or no concentrates. POTENTIAL CLINICAL RELEVANCE: It is one of the aims of population medicine to prevent the development of behavioural disorders. Further research is needed to test the concluding hypotheses in experimental studies or to verify them in the context of similar observational studies.
Address Institute of Animal Sciences, Swiss Federal Institute of Technology (ETH), LFW B55. 1, CH-8092 Zurich, Switzerland
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0425-1644 ISBN Medium
Area Expedition Conference
Notes PMID:12638792 Approved no
Call Number Serial 1907
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Author Williams, J.L.; Friend, T.H.; Collins, M.N.; Toscano, M.J.; Sisto-Burt, A.; Nevill, C.H.
Title Effects of imprint training procedure at birth on the reactions of foals at age six months Type Journal Article
Year (up) 2003 Publication Equine Veterinary Journal Abbreviated Journal Equine Vet J
Volume 35 Issue 2 Pages 127-132
Keywords Age Factors; Animal Husbandry/methods; Animals; Animals, Newborn/*psychology; *Behavior, Animal; *Bonding, Human-Pet; Female; Handling (Psychology); Horses/*psychology; Humans; *Imprinting (Psychology); Male; Random Allocation; Socialization; Time Factors
Abstract REASONS FOR PERFORMING STUDY: While imprint training procedures have been promoted in popular magazines, they have received limited scientific investigation. OBJECTIVES: To determine the effects of a neonatal imprint training procedure on 6-month-old foals and to determine if any one session had a greater effect than others. METHODS: Foals (n = 131) were divided into the following treatments: no imprint training, imprint training at birth, 12, 24 and 48 h after birth or imprint training only at birth, 12, 24, 48, or 72 h after birth. Foals then received minimal human handling until they were tested at 6 months. RESULTS: During training, time to complete exposure to the stimulus was significant for only 2 of 6 stimuli. Percentage change in baseline heart rate was significant for only 2 of 10 stimuli. These 4 effects were randomly spread across treatments. CONCLUSIONS: Neither the number of imprint training sessions (0, 1, or 4) nor the timing of imprint training sessions (none, birth, 12, 24, 48, or 72 h after birth) influenced the foal's behaviour at 6 months of age. POTENTIAL CLINICAL RELEVANCE: In this study, imprint training did not result in better behaved, less reactive foals.
Address Department of Animal Science, 2471 TAMUS, Texas A&M University College Station, Texas 77845-2471, USA
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0425-1644 ISBN Medium
Area Expedition Conference
Notes PMID:12638787 Approved no
Call Number Serial 1908
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Author Herholz, C.P.; Gerber, V.; Tschudi, P.; Straub, R.; Imhof, A.; Busato, A.
Title Use of volumetric capnography to identify pulmonary dysfunction in horses with and without clinically apparent recurrent airway obstruction Type Journal Article
Year (up) 2003 Publication American Journal of Veterinary Research Abbreviated Journal Am J Vet Res
Volume 64 Issue 3 Pages 338-345
Keywords Aging; Airway Obstruction/*complications/diagnosis/*veterinary; Animals; Capnography/*methods/*veterinary; Female; Horse Diseases/*diagnosis; Horses; Lung Diseases/complications/*diagnosis/*veterinary; Male; Predictive Value of Tests
Abstract OBJECTIVE: To investigate whether volumetric capnography indices could be used to differentiate between horses without recurrent airway obstruction (RAO) and horses with RAO that were in clinical remission or that had clinically apparent RAO. ANIMALS: 70 adult Swiss Warmblood horses (20 used for pleasure riding and 50 used for dressage or show jumping). PROCEDURE: Horses were allocated to 4 groups on the basis of history, clinical signs, results of endoscopy, and cytologic findings (group 1, 21 healthy horses; group 2, 22 horses with RAO that were in remission; group 3, 16 horses with mild RAO; group 4, 11 horses with exacerbated RAO). Expiratory volume and CO2 curves were recorded by use of a computerized ultrasonic spirometer. Volumetric capnograms were plotted, and derived indices were calculated. RESULTS: Dead-space volume (VD) was calculated by use of the Bohr equation (VD(Bohr)) and for physiologic VD (VD(phys)). Ratios for VD(Bohr) to expiratory tidal volume (VT) and VD(phys) to V(T) as well as an index of effective CO2 elimination were significantly different among groups of horses. Age and use of the horses also significantly affected volumetric capnography indices. CONCLUSIONS AND CLINICAL RELEVANCE: Ratios of VD(Bohr) to VT and VD(phys) to VT as well as an index of effective CO2 elimination were sufficiently sensitive measures to distinguish between healthy horses and horses with RAO in remission. To optimize the ability of volumetric capnography indices to differentiate among horses in heterogeneous populations, it is important to account for effects of age and specific use of the horses.
Address Department of Equine Internal Medicine, Faculty of Veterinary Medicine, University of Berne, Langgasstr 124, CH-3012 Berne, Switzerland
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0002-9645 ISBN Medium
Area Expedition Conference
Notes PMID:12661875 Approved no
Call Number Equine Behaviour @ team @ Serial 3724
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Author Gulotta, M.; Rogatsky, E.; Callender, R.H.; Dyer, R.B.
Title Primary folding dynamics of sperm whale apomyoglobin: core formation Type Journal Article
Year (up) 2003 Publication Biophysical Journal Abbreviated Journal Biophys J
Volume 84 Issue 3 Pages 1909-1918
Keywords Animals; Apoproteins/*chemistry; Crystallography/*methods; Horses; Myocardium/chemistry; Myoglobin/*chemistry; Protein Conformation; *Protein Folding; Species Specificity; Structure-Activity Relationship; Temperature; Whales
Abstract The structure, thermodynamics, and kinetics of heat-induced unfolding of sperm whale apomyoglobin core formation have been studied. The most rudimentary core is formed at pH(*) 3.0 and up to 60 mM NaCl. Steady state for ultraviolet circular dichroism and fluorescence melting studies indicate that the core in this acid-destabilized state consists of a heterogeneous composition of structures of approximately 26 residues, two-thirds of the number involved for horse heart apomyoglobin under these conditions. Fluorescence temperature-jump relaxation studies show that there is only one process involved in Trp burial. This occurs in 20 micro s for a 7 degrees jump to 52 degrees C, which is close to the limits placed by diffusion on folding reactions. However, infrared temperature jump studies monitoring native helix burial are biexponential with times of 5 micro s and 56 micro s for a similar temperature jump. Both fluorescence and infrared fast phases are energetically favorable but the slow infrared absorbance phase is highly temperature-dependent, indicating a substantial enthalpic barrier for this process. The kinetics are best understood by a multiple-pathway kinetics model. The rapid phases likely represent direct burial of one or both of the Trp residues and parts of the G- and H-helices. We attribute the slow phase to burial and subsequent rearrangement of a misformed core or to a collapse having a high energy barrier wherein both Trps are solvent-exposed.
Address Department of Biochemistry, Albert Einstein College of Medicine, Bronx, New York 10461, USA. gulotta@aecom.yu.edu
Corporate Author Thesis
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Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0006-3495 ISBN Medium
Area Expedition Conference
Notes PMID:12609893 Approved no
Call Number Equine Behaviour @ team @ Serial 3783
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Author Ganswindt, A.; Palme, R.; Heistermann, M.; Borragan, S.; Hodges, J.K.
Title Non-invasive assessment of adrenocortical function in the male African elephant (Loxodonta africana) and its relation to musth Type Journal Article
Year (up) 2003 Publication General and Comparative Endocrinology Abbreviated Journal Gen Comp Endocrinol
Volume 134 Issue 2 Pages 156-166
Keywords Adrenal Cortex/*metabolism/secretion; Adrenal Cortex Function Tests/methods/*veterinary; Adrenocorticotropic Hormone/physiology; Animals; Carbon Isotopes/diagnostic use; Chromatography, High Pressure Liquid/veterinary; Elephants/*metabolism/urine; Feces/*chemistry; Glucocorticoids/analysis/urine; Hydrocortisone/*analysis/diagnostic use/urine; Immunoenzyme Techniques/methods/veterinary; Male; Reproduction/physiology; Sexual Behavior, Animal/physiology; Stress, Psychological/diagnosis/*physiopathology; Testosterone/*analysis/diagnostic use/urine
Abstract Adult male elephants periodically show the phenomenon of musth, a condition associated with increased aggressiveness, restlessness, significant weight reduction and markedly elevated androgen levels. It has been suggested that musth-related behaviours are costly and that therefore musth may represent a form of physiological stress. In order to provide data on this largely unanswered question, the first aim of this study was to evaluate different assays for non-invasive assessment of adrenocortical function in the male African elephant by (i) characterizing the metabolism and excretion of [3H]cortisol (3H-C) and [14C]testosterone (14C-T) and (ii) using this information to evaluate the specificity of four antibodies for determination of excreted cortisol metabolites, particularly with respect to possible cross-reactions with androgen metabolites, and to assess their biological validity using an ACTH challenge test. Based on the methodology established, the second objective was to provide data on fecal cortisol metabolite concentrations in bulls during the musth and non-musth condition. 3H-C (1 mCi) and 14C-T (100 microCi) were injected simultaneously into a 16 year old male and all urine and feces collected for 30 and 86 h, respectively. The majority (82%) of cortisol metabolites was excreted into the urine, whereas testosterone metabolites were mainly (57%) excreted into the feces. Almost all radioactive metabolites recovered from urine were conjugated (86% 3H-C and 97% 14C-T). In contrast, 86% and >99% of the 3H-C and 14C-T metabolites recovered from feces consisted of unconjugated forms. HPLC separations indicated the presence of various metabolites of cortisol in both urine and feces, with cortisol being abundant in hydrolysed urine, but virtually absent in feces. Although all antibodies measured substantial amounts of immunoreactivity after HPLC separation of peak radioactive samples and detected an increase in glucocorticoid output following the ACTH challenge, only two (in feces against 3alpha,11-oxo-cortisol metabolites, measured by an 11-oxo-etiocholanolone-EIA and in urine against cortisol, measured by a cortisol-EIA) did not show substantial cross-reactivity with excreted 14C-T metabolites and could provide an acceptable degree of specificity for reliable assessment of glucocorticoid output from urine and feces. Based on these findings, concentrations of immunoreactive 3alpha,11-oxo-cortisol metabolites were determined in weekly fecal samples collected from four adult bulls over periods of 11-20 months to examine whether musth is associated with increased adrenal activity. Results showed that in each male levels of these cortisol metabolites were not elevated during periods of musth, suggesting that in the African elephant musth is generally not associated with marked elevations in glucocorticoid output. Given the complex nature of musth and the variety of factors that are likely to influence its manifestation, it is clear, however, that further studies, particularly on free-ranging animals, are needed before a possible relationship between musth and adrenal function can be resolved. This study also clearly illustrates the potential problems associated with cross-reacting metabolites of gonadal steroids in EIAs measuring glucocorticoid metabolites. This has to be taken into account when selecting assays and interpreting results of glucocorticoid metabolite analysis, not only for studies in the elephant but also in other species.
Address German Primate Centre, Department of Reproductive Biology, Kellnerweg 4, 37077 Gottingen, Germany. ganswindt@www.dpz.gdwg.de
Corporate Author Thesis
Publisher Place of Publication Editor
Language English Summary Language Original Title
Series Editor Series Title Abbreviated Series Title
Series Volume Series Issue Edition
ISSN 0016-6480 ISBN Medium
Area Expedition Conference
Notes PMID:14511986 Approved no
Call Number Equine Behaviour @ team @ Serial 4085
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