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Author |
Ishida, N.; Hirano, T.; Mukoyama, H. |
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Title |
Detection of aberrant alleles in the D-loop region of equine mitochondrial DNA by single-strand conformation polymorphism (SSCP) analysis |
Type |
Journal Article |
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Year |
1994 |
Publication |
Animal Genetics |
Abbreviated Journal |
Anim Genet |
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Volume |
25 |
Issue |
4 |
Pages |
287 |
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Keywords |
*Alleles; Animals; Base Sequence; *DNA, Mitochondrial; DNA, Single-Stranded/genetics; Female; Gene Frequency; Genomic Imprinting; Horses/*genetics; Male; Molecular Sequence Data; Pedigree; *Polymorphism, Genetic |
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Abstract |
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Address |
Laboratory of Molecular and Cellular Biology, Japan Racing Association, Tokyo |
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English |
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ISSN |
0268-9146 |
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Notes |
PMID:7985852 |
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no |
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Call Number |
Equine Behaviour @ team @ |
Serial |
2213 |
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Author |
Ishida, N.; Oyunsuren, T.; Mashima, S.; Mukoyama, H.; Saitou, N. |
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Title |
Mitochondrial DNA sequences of various species of the genus Equus with special reference to the phylogenetic relationship between Przewalskii's wild horse and domestic horse |
Type |
Journal Article |
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Year |
1995 |
Publication |
Journal of Molecular Evolution |
Abbreviated Journal |
J Mol Evol |
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Volume |
41 |
Issue |
2 |
Pages |
180-188 |
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Keywords |
Animals; Base Sequence; Chromosomes; Conserved Sequence/genetics; DNA, Mitochondrial/*genetics; Evolution; Genetic Variation/*genetics; Horses/*genetics; Molecular Sequence Data; *Phylogeny; RNA, Transfer, Pro/genetics; Sequence Alignment; Sequence Analysis, DNA |
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Abstract |
The noncoding region between tRNAPro and the large conserved sequence block is the most variable region in the mammalian mitochondrial DNA D-loop region. This variable region (ca. 270 bp) of four species of Equus, including Mongolian and Japanese native domestic horses as well as Przewalskii's (or Mongolian) wild horse, were sequenced. These data were compared with our recently published Thoroughbred horse mitochondrial DNA sequences. The evolutionary rate of this region among the four species of Equus was estimated to be 2-4 x 10(-8) per site per year. Phylogenetic trees of Equus species demonstrate that Przewalskii's wild horse is within the genetic variation among the domestic horse. This suggests that the chromosome number change (probably increase) of the Przewalskii's wild horse occurred rather recently. |
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Address |
Laboratory of Molecular and Cellular Biology, Japan Racing Association, Tokyo |
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English |
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ISSN |
0022-2844 |
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Notes |
PMID:7666447 |
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Call Number |
Equine Behaviour @ team @ |
Serial |
5042 |
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Author |
Jansen, T.; Forster, P.; Levine, M.A.; Oelke, H.; Hurles, M.; Renfrew, C.; Weber, J.; Olek, K. |
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Title |
Mitochondrial DNA and the origins of the domestic horse |
Type |
Journal Article |
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Year |
2002 |
Publication |
Proceedings of the National Academy of Sciences of the United States of America |
Abbreviated Journal |
Proc. Natl. Acad. Sci. U.S.A. |
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Volume |
99 |
Issue |
16 |
Pages |
10905-10910 |
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Keywords |
Animals; Animals, Domestic/classification/*genetics; Base Sequence; DNA, Complementary; *DNA, Mitochondrial; *Evolution, Molecular; Horses/classification/*genetics; Molecular Sequence Data; Phylogeny |
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Abstract |
The place and date of the domestication of the horse has long been a matter for debate among archaeologists. To determine whether horses were domesticated from one or several ancestral horse populations, we sequenced the mitochondrial D-loop for 318 horses from 25 oriental and European breeds, including American mustangs. Adding these sequences to previously published data, the total comes to 652, the largest currently available database. From these sequences, a phylogenetic network was constructed that showed that most of the 93 different mitochondrial (mt)DNA types grouped into 17 distinct phylogenetic clusters. Several of the clusters correspond to breeds and/or geographic areas, notably cluster A2, which is specific to Przewalski's horses, cluster C1, which is distinctive for northern European ponies, and cluster D1, which is well represented in Iberian and northwest African breeds. A consideration of the horse mtDNA mutation rate together with the archaeological timeframe for domestication requires at least 77 successfully breeding mares recruited from the wild. The extensive genetic diversity of these 77 ancestral mares leads us to conclude that several distinct horse populations were involved in the domestication of the horse. |
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Address |
Biopsytec Analytik GmbH, Marie-Curie-Strasse 1, 53359 Rheinbach, Germany. jansen@biopsytec.com |
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English |
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ISSN |
0027-8424 |
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Notes |
PMID:12130666 |
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no |
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Call Number |
refbase @ user @ |
Serial |
772 |
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Author |
Macfadden, B.J. |
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Title |
Evolution. Fossil horses--evidence for evolution |
Type |
Journal Article |
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Year |
2005 |
Publication |
Science (New York, N.Y.) |
Abbreviated Journal |
Science |
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Volume |
307 |
Issue |
5716 |
Pages |
1728-1730 |
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Keywords |
Animals; Body Size; DNA, Mitochondrial; Diet; *Equidae/anatomy & histology/classification/genetics; *Evolution; Feeding Behavior; *Fossils; *Horses/anatomy & histology/classification/genetics; Paleodontology; Phylogeny; Time; Tooth/anatomy & histology |
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Address |
Florida Museum of Natural History, University of Florida, Gainesville, FL 32611, USA. bmacfadd@flmnh.ufl.edu |
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English |
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ISSN |
1095-9203 |
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Notes |
PMID:15774746 |
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no |
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Call Number |
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Serial |
1892 |
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Author |
Oakenfull, E.A.; Ryder, O.A. |
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Title |
Mitochondrial control region and 12S rRNA variation in Przewalski's horse (Equus przewalskii) |
Type |
Journal Article |
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Year |
1998 |
Publication |
Animal Genetics |
Abbreviated Journal |
Anim Genet |
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Volume |
29 |
Issue |
6 |
Pages |
456-459 |
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Keywords |
Animals; DNA, Mitochondrial/*genetics; Female; *Genetic Variation; Horses/*genetics; Male; Pedigree; RNA, Ribosomal/*genetics |
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Abstract |
Variation in the control region and the 12S rRNA gene of all surviving mitochondrial lineages of Przewalski's horse was investigated. Variation is low despite the present day population being descended from 13 individuals probably representing animals from three different regions of its range. Phylogenetic comparison of these sequences, with sequences for the domestic horse, does not resolve the ancestral status of either horse. |
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Address |
Center for Reproduction of Endangered Species, Zoological Society of San Diego, CA 92112, USA |
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English |
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0268-9146 |
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Notes |
PMID:9883508 |
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no |
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Call Number |
Equine Behaviour @ team @ |
Serial |
5040 |
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Author |
Wallner, B.; Brem, G.; Muller, M.; Achmann, R. |
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Title |
Fixed nucleotide differences on the Y chromosome indicate clear divergence between Equus przewalskii and Equus caballus |
Type |
Journal Article |
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Year |
2003 |
Publication |
Animal Genetics |
Abbreviated Journal |
Anim Genet |
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Volume |
34 |
Issue |
6 |
Pages |
453-456 |
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Keywords |
Animals; Base Sequence; DNA, Mitochondrial/genetics; Genetic Variation/*genetics; Horses/classification/*genetics; Male; Molecular Sequence Data; Phylogeny; Probability; Species Specificity; Y Chromosome/*genetics |
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Abstract |
The phylogenetic relationship between Equus przewalskii and E. caballus is often a matter of debate. Although these taxa have different chromosome numbers, they do not form monophyletic clades in a phylogenetic tree based on mtDNA sequences. Here we report sequence variation from five newly identified Y chromosome regions of the horse. Two fixed nucleotide differences on the Y chromosome clearly display Przewalski's horse and domestic horse as sister taxa. At both positions the Przewalski's horse haplotype shows the ancestral state, in common with the members of the zebra/ass lineage. We discuss the factors that may have led to the differences in mtDNA and Y-chromosomal observations. |
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Address |
Institut fur Tierzucht und Genetik, Veterinarmedizinische Universitat Wien, Veterinarplatz, Wien, Austria. wallner@i122server.vu-wien.ac.at |
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English |
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ISSN |
0268-9146 |
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Notes |
PMID:14687077 |
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no |
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Call Number |
Equine Behaviour @ team @ |
Serial |
5038 |
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Author |
Zhao, C.J.; Qin, Y.H.; Lee, X.H.; Wu, C. |
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Title |
Molecular and cytogenetic paternity testing of a male offspring of a hinny |
Type |
Journal Article |
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Year |
2006 |
Publication |
Journal of Animal Breeding and Genetics = Zeitschrift fur Tierzuchtung und Zuchtungsbiologie |
Abbreviated Journal |
J Anim Breed Genet |
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Volume |
123 |
Issue |
6 |
Pages |
403-405 |
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Keywords |
Animals; Cytogenetic Analysis; DNA, Mitochondrial/genetics; Equidae/*genetics; Female; Horses/genetics; Hybridization, Genetic; Male; Microsatellite Repeats; Pedigree; Protamines/genetics; Sexual Behavior, Animal |
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Abstract |
An alleged male foal of a female mule, whose sire and grandparents were unknown, was identified for its pedigree. Parentage testing was conducted by comparing polymorphism of 12 microsatellite DNA sites and mitochondrial D-loop sequences of the male foal and the female mule. Both the sequence analysis of species-specific DNA fragments and a cytogenetic analysis were performed to identify the species of the foal and its parents. The results showed that the alleged female mule is actually a hinny, and the male foal, which possesses 62 chromosomes, qualifies as an offspring of the female hinny and a jack donkey. |
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Address |
Equine Center, China Agricultural University, Beijing, China |
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English |
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ISSN |
0931-2668 |
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Notes |
PMID:17177697 |
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Call Number |
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Serial |
1846 |
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