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Murphy, M.A.; Waits, L.P.; Kendall, K.C.; Wasser, S.K.; Higbee, J.A.; Bogden, R. |
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An evaluation of long-term preservation methods for brown bear (Ursus arctos) faecal DNA samples |
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2002 |
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Conservation Genetics |
Abbreviated Journal |
Conservat. Genet. |
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3 |
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4 |
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435-440 |
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Relatively few large-scale faecal DNA studieshave been initiated due to difficulties inamplifying low quality and quantity DNAtemplate. To improve brown bear faecal DNA PCRamplification success rates and to determinepost collection sample longevity, fivepreservation methods were evaluated: 90%ethanol, DETs buffer, silica-dried, oven-driedstored at room temperature, and oven-driedstored at -20 °C. Preservationeffectiveness was evaluated for 50 faecalsamples by PCR amplification of a mitochondrialDNA (mtDNA) locus (~146 bp) and a nuclear DNA(nDNA) locus (~200 bp) at time points of oneweek, one month, three months and six months. Preservation method and storage timesignificantly impacted mtDNA and nDNAamplification success rates. For mtDNA, allpreservation methods had >= 75% success atone week, but storage time had a significantimpact on the effectiveness of the silicapreservation method. Ethanol preserved sampleshad the highest success rates for both mtDNA(86.5%) and nDNA (84%). Nuclear DNAamplification success rates ranged from 26-88%, and storage time had a significant impacton all methods but ethanol. Preservationmethod and storage time should be importantconsiderations for researchers planningprojects utilizing faecal DNA. We recommendpreservation of faecal samples in 90% ethanolwhen feasible, although when collecting inremote field conditions or for both DNA andhormone assays a dry collection method may beadvantageous. |
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1572-9737 |
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Equine Behaviour @ team @ Murphy2002 |
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6574 |
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Gehring, T.M.; VerCauteren, K.C.; Provost, M.L.; Cellar, A.C. |
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Title |
Utility of livestock-protection dogs for deterring wildlife from cattle farms |
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2010 |
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Wildl. Res. |
Abbreviated Journal |
Wildl. Res. |
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37 |
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8 |
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715-721 |
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bovine tuberculosis, coyote, grey wolf, livestock protection dog, mesopredators, white-tailed deer, wildlife damage management. |
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Context. Livestock producers worldwide are negatively affected by livestock losses because of predators and wildlife-transmitted diseases. In the western Great Lakes Region of the United States, this conflict has increased as grey wolf (Canis lupus) populations have recovered and white-tailed deer (Odocoileus virginianus) have served as a wildlife reservoir for bovine tuberculosis (Myobacterium bovis).Aims. We conducted field experiments on cattle farms to evaluate the effectiveness of livestock-protection dogs (LPDs) for excluding wolves, coyotes (C. latrans), white-tailed deer and mesopredators from livestock pastures.Methods. We integrated LPDs on six cattle farms (treatment) and monitored wildlife use with tracking swaths on these farms, concurrent with three control cattle farms during 2005-2008. The amount of time deer spent in livestock pastures was recorded using direct observation.Key results. Livestock pastures protected by LPDs had reduced use by these wildlife compared with control pastures not protected by LPDs. White-tailed deer spent less time in livestock pastures protected by LPDs compared with control pastures not protected by LPDs.Conclusions. Our research supports the theory that LPDs can be an effective management tool for reducing predation and disease transmission. We also demonstrate that LPDs are not limited to being used only with sheep and goats; they can also be used to protect cattle.Implications. On the basis of our findings, we support the use of LPDs as a proactive management tool that producers can implement to minimise the threat of livestock depredations and transmission of disease from wildlife to livestock. LPDs should be investigated further as a more general conservation tool for protecting valuable wildlife, such as ground-nesting birds, that use livestock pastures and are affected by predators that use these pastures. |
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Equine Behaviour @ team @ |
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6575 |
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Iliopoulos, Y.; Sgardelis, S.; Koutis, V.; Savaris, D. |
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Wolf depredation on livestock in central Greece |
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Journal Article |
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2009 |
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Mammal Research |
Abbreviated Journal |
Mamm. Reas. |
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54 |
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1 |
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11-22 |
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We studied wolfCanis lupus Linnaeus, 1758 -- livestock conflict in central Greece by investigating patterns of 267 verified wolf attacks on livestock for 21 months. Wolves attacked adult goats 43% and cattle 218% more than expected, whereas sheep 41% less than expected from their availability. Wolves killed less than four sheep or goats in 79%, and one cow or calf in 74% of depredation events, respectively. We recorded higher attack rates during wolf post-weaning season. Wolf attacks on strayed, or kept inside non predator-proof enclosures, sheep and goats, were on average two to four times respectively more destructive than those when livestock was guarded by a shepherd. Sheepdog use reduced losses per attack. Optimal sheepdog number ranged from 3 to 9 animals depending on flock size. Losses per attack were positively related to the number of wolves involved. Total losses per farm were positively correlated with the size of livestock unit but percentage losses per capita increased with decreasing flock size. Management implications to mitigate livestock depredation are discussed. |
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2199-241x |
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Equine Behaviour @ team @ Iliopoulos2009 |
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6576 |
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Ruid, D.B.; Paul, W.J.; Roell, B.J.; Wydeven, A.P.; Willging, R.C.; Jurewicz, R.L.; Lonsway, D.H. |
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Wolf-Human Conflicts and Management in Minnesota, Wisconsin, and Michigan |
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2009 |
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Recovery of Gray Wolves in the Great Lakes Region of the United States: An Endangered Species Success Story |
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279-295 |
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Springer New York |
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New York, NY |
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Wydeven, A.P.; Van Deelen, T.R.; Heske, E.J. |
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978-0-387-85952-1 |
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Equine Behaviour @ team @ Ruid2009 |
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6577 |
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Schanz, L.; Krueger, K.; Hintze, S. |
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Sex and Age Don't Matter, but Breed Type Does--Factors Influencing Eye Wrinkle Expression in Horses |
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2019 |
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Frontiers in Veterinary Science |
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Front. Vet. Sci. |
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6 |
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154 |
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Identifying valid indicators to assess animals' emotional states is a critical objective of animal welfare science. In horses, eye wrinkles above the eyeball have been shown to be affected by pain and other emotional states. From other species we know that individual characteristics, e.g. age in humans, affect facial wrinkles, but it has not yet been investigated whether eye wrinkle expression in horses is systematically affected by such characteristics. Therefore, the aim of this study was to assess how age, sex, breed type, body condition and coat colour affect the expression and/or the assessment of eye wrinkles in horses. To this end, we adapted the eye wrinkle assessment scale from Hintze et al. (2016) and assessed eye wrinkle expression in pictures taken from the left and the right eye of 181 horses in a presumably neutral situation, using five outcome measures: a qualitative first impression reflecting how worried the horse is perceived by humans, the extent to which the brow is raised, the number of wrinkles, their markedness and the angle between a line through both corners of the eye and the topmost wrinkle. All measures could be assessed highly reliable with respect to intra- and inter-observer agreement. Breed type affected the width of the angle (F2, 114 = 8.20, p < 0.001), with thoroughbreds having the narrowest angle (M = 23.80, SD = 1.60), followed by warmbloods (M = 28.00, SD = 0.60), and coldbloods (M = 31.00, SD = 0.90). None of the other characteristics affected any of the outcome measures, and eye wrinkle expression did not differ between the left and the right eye area (all p-values > 0.05). In conclusion, horses' eye wrinkle expression and its assessment in neutral situations was not systematically affected by the investigated characteristics, except for 'breed type', which accounted for some variation in 'angle'; how much eye wrinkle expression is affected by emotion or perhaps mood needs further investigation and validation. |
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2297-1769 |
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Equine Behaviour @ team @ |
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6578 |
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Mann Janet; Patterson Eric M. |
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Tool use by aquatic animals |
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2013 |
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Philosophical Transactions of the Royal Society B: Biological Sciences |
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Phil. Trans. Biol. Sci. |
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368 |
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1630 |
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20120424 |
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Royal Society |
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doi: 10.1098/rstb.2012.0424 |
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Equine Behaviour @ team @ |
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6579 |
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Krueger, K.; Esch, L.; Byrne, R. |
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Animal behaviour in a human world: A crowdsourcing study on horses that open door and gate mechanisms |
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2019 |
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Plos One |
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Plos One |
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14 |
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6 |
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e0218954 |
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Anecdotal reports of horses opening fastened doors and gates are an intriguing way of exploring the possible scope of horses' problem-solving capacities. The species' natural environment has no analogues of the mechanisms involved. Scientific studies on the topic are missing, because the rate of occurrence is too low for exploration under controlled conditions. Therefore, we compiled from lay persons case reports of horses opening closed doors and gates. Additionally, we collected video documentations at the internet platform YouTube, taking care to select raw data footage of unedited, clearly described and clearly visible cases of animals with no distinct signs of training or reduced welfare. The data included individuals opening 513 doors or gates on hinges, 49 sliding doors, and 33 barred doors and gateways; mechanisms included 260 cases of horizontal and 155 vertical bars, 43 twist locks, 42 door handles, 34 electric fence handles, 40 carabiners, and 2 locks with keys. Opening was usually for escape, but also for access to food or stable-mates, or out of curiosity or playfulness. While 56 percent of the horses opened a single mechanism at one location, 44 percent opened several types of mechanism (median = 2, min. = 1, max. = 5) at different locations (median = 2, min. = 1, max. = 4). The more complex the mechanism was, the more movements were applied, varying from median 2 for door handles to 10 for carabiners. Mechanisms requiring head- or lip-twisting needed more movements, with significant variation between individuals. 74 horses reported in the questionnaire had options for observing the behaviour in stable mates, 183 did not, which indicates that the latter learned to open doors and gates either individually or from observing humans. Experience favours opening efficiency; subjects which opened several door types applied fewer movements per lock than horses which opened only one door type. We failed to identify a level of complexity of door-fastening mechanism that was beyond the learning capacity of the horse to open. Thus, all devices in frequent use, even carabiners and electric fence handles, are potentially vulnerable to opening by horses, something which needs to be considered in relation to keeping horses safely. |
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Public Library of Science |
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Equine Behaviour @ team @ |
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6580 |
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McCoy, D.E.; Schiestl, M.; Neilands, P.; Hassall, R.; Gray, R.D.; Taylor, A.H. |
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New Caledonian Crows Behave Optimistically after Using Tools |
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2019 |
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Current Biology |
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tool use; New Caledonian crows; optimism; cognitive bias; animal emotion; intrinsic motivation; comparative cognition |
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Summary Are complex, species-specific behaviors in animals reinforced by material reward alone or do they also induce positive emotions? Many adaptive human behaviors are intrinsically motivated: they not only improve our material outcomes, but improve our affect as well [1, 2, 3, 4, 5, 6, 7, 8]. Work to date on animal optimism, as an indicator of positive affect, has generally focused on how animals react to change in their circumstances, such as when their environment is enriched [9, 10, 11, 12, 13, 14] or they are manipulated by humans [15, 16, 17, 18, 19, 20, 21, 22, 23], rather than whether complex actions improve emotional state. Here, we show that wild New Caledonian crows are optimistic after tool use, a complex, species-specific behavior. We further demonstrate that this finding cannot be explained by the crows needing to put more effort into gaining food. Our findings therefore raise the possibility that intrinsic motivation (enjoyment) may be a fundamental proximate cause in the evolution of tool use and other complex behaviors. Video Abstract |
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0960-9822 |
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Equine Behaviour @ team @ |
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6581 |
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d'Ingeo, S.; Quaranta, A.; Siniscalchi, M.; Stomp, M.; Coste, C.; Bagnard, C.; Hausberger, M.; Cousillas, H. |
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Horses associate individual human voices with the valence of past interactions: a behavioural and electrophysiological study |
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2019 |
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Scientific Reports |
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9 |
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1 |
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11568 |
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Brain lateralization is a phenomenon widely reported in the animal kingdom and sensory laterality has been shown to be an indicator of the appraisal of the stimulus valence by an individual. This can prove a useful tool to investigate how animals perceive intra- or hetero-specific signals. The human-animal relationship provides an interesting framework for testing the impact of the valence of interactions on emotional memories. In the present study, we tested whether horses could associate individual human voices with past positive or negative experiences. Both behavioural and electroencephalographic measures allowed examining laterality patterns in addition to the behavioural reactions. The results show that horses reacted to voices associated with past positive experiences with increased attention/arousal (gamma oscillations in the right hemisphere) and indicators of a positive emotional state (left hemisphere activation and ears held forward), and to those associated with past negative experiences with negative affective states (right hemisphere activation and ears held backwards). The responses were further influenced by the animals' management conditions (e.g. box or pasture). Overall, these results, associating brain and behaviour analysis, clearly demonstrate that horses' representation of human voices is modulated by the valence of prior horse-human interactions. |
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Equine Behaviour @ team @ d'Ingeo2019 |
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6582 |
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Irving-Pease, E.K.; Ryan, H.; Jamieson, A.; Dimopoulos, E.A.; Larson, G.; Frantz, L.A.F. |
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Paleogenomics of Animal Domestication |
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2019 |
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Paleogenomics: Genome-Scale Analysis of Ancient DNA |
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225-272 |
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Starting with dogs, over 15,000 years ago, the domestication of animals has been central in the development of modern societies. Because of its importance for a range of disciplines – including archaeology, biology and the humanities – domestication has been studied extensively. This chapter reviews how the field of paleogenomics has revolutionised, and will continue to revolutionise, our understanding of animal domestication. We discuss how the recovery of ancient DNA from archaeological remains is allowing researchers to overcome inherent shortcomings arising from the analysis of modern DNA alone. In particular, we show how DNA, extracted from ancient substrates, has proven to be a crucial source of information to reconstruct the geographic and temporal origin of domestic species. We also discuss how ancient DNA is being used by geneticists and archaeologists to directly observe evolutionary changes linked to artificial and natural selection to generate a richer understanding of this fascinating process. |
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Springer International Publishing |
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Cham |
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Lindqvist, C.; Rajora, O.P. |
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978-3-030-04753-5 |
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Equine Behaviour @ team @ Irving-Pease2019 |
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6583 |
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