Abstract: Predation is a major force in shaping biological communities, both over ecological and evolutionary timescales. In response to predation pressure, prey have evolved characteristics designed to mitigate predation pressure. We evaluated predator foraging biases in relation to prey characteristics across 16 vertebrate communities. We show that although predator biases vary, some prey traits are consistently associated with predator diet composition. Within their acceptable prey size range, predators show positive bias toward larger bodied prey, small-brained prey (controlling for body size), small group size, and terrestriality. Thus, whether predator foraging decisions are passive or active, predator choice exerts differential pressure on prey species according to prey characteristics. Predator biases also were positively associated with early age at maturity, supporting the role of mortality in driving life-history characteristics. These results support several theoretical models of predation including its role as a selective force driving evolutionary changes in life history, brain size and sociality, optimal diet theory, and antiapostatic predation.

Abstract: Through combining theoretical models and empirical data, complexity science has increased our understanding of social behavior of animals, in particular of social insects, primates, and fish. What are missing are studies of collective behavior of huge swarms of birds. Recently detailed empirical data have been collected of the swarming maneuvers of large flocks of thousands of starlings (Sturnus vulgaris) at their communal sleeping site (roost). Their flocking maneuvers are of dazzling complexity in their changes in density and flock shape, but the processes underlying them are still a mystery. Recent models show that flocking may arise by self-organization from rules of co-ordination with nearby neighbors, but patterns in these models come nowhere near the complexity of those of the real starlings. The question of this paper, therefore, is whether such complex patterns can emerge by self-organization. In our computer model, called StarDisplay, we combine the usual rules of co-ordination based on separation, attraction, and alignment with specifics of starling behavior: 1) simplified aerodynamics of flight, especially rolling during turning, 2) movement above a “roosting area” (sleeping site), and 3) the low fixed number of interaction neighbors (i.e., the topological range). Our model generates patterns that resemble remarkably not only qualitative but also quantitative empirical data collected in Rome through video recordings and position measurements by stereo photography. Our results provide new insights into the mechanisms underlying complex flocking maneuvers of starlings and other birds.

Abstract: Abstract  SOCPROG is a set of programs which analyses data on animal associations. Data usually come from observations of the social behaviour of individually identifiable animals. Associations among animals, sampling periods, restrictions on the data and association indices can be defined very flexibly. SOCPROG can analyse data sets including 1,000 or more individuals. Association matrices are displayed using sociograms, principal coordinates analysis, multidimensional scaling and cluster analyses. Permutation tests, Mantel and related tests and matrix correlation methods examine hypotheses about preferred associations among individuals and classes of individual. Weighted network statistics are calculated and can be tested against null hypotheses. Temporal analyses include displays of lagged association rates (rates of reassociation following an association). Models can be fitted to lagged association rates. Multiple association measures, including measures produced by other programs such as genetic or range use data, may be analysed using Mantel tests and principal components analysis. SOCPROG also performs mark-recapture population analyses and movement analyses. SOCPROG is written in the programming language MATLAB and may be downloaded free from the World Wide Web.

Abstract: Longitudinal behavioral data generally contains a significant amount of structure. In this work, we identify the structure inherent in daily behavior with models that can accurately analyze, predict, and cluster multimodal data from individuals and communities within the social network of a population. We represent this behavioral structure by the principal components of the complete behavioral dataset, a set of characteristic vectors we have termed eigenbehaviors. In our model, an individual’s behavior over a specific day can be approximated by a weighted sum of his or her primary eigenbehaviors. When these weights are calculated halfway through a day, they can be used to predict the day’s remaining behaviors with 79% accuracy for our test subjects. Additionally, we demonstrate the potential for this dimensionality reduction technique to infer community affiliations within the subjects’ social network by clustering individuals into a behavior space spanned by a set of their aggregate eigenbehaviors. These behavior spaces make it possible to determine the behavioral similarity between both individuals and groups, enabling 96% classification accuracy of community affiliations within the population-level social network. Additionally, the distance between individuals in the behavior space can be used as an estimate for relational ties such as friendship, suggesting strong behavioral homophily amongst the subjects. This approach capitalizes on the large amount of rich data previously captured during the Reality Mining study from mobile phones continuously logging location, proximate phones, and communication of 100 subjects at MIT over the course of 9 months. As wearable sensors continue to generate these types of rich, longitudinal datasets, dimensionality reduction techniques such as eigenbehaviors will play an increasingly important role in behavioral research.

Abstract: Researchers are increasingly turning to network theory to understand the social nature of animal populations. We present a computational framework that is the first step in a series of works that will allow us to develop a quantitative methodology of social network sampling to aid ecologists in their social network data collection. To develop our methodology, we need to be able to generate networks from which to sample. Ideally, we need to perform a systematic study of sampling protocols on different known network structures, as network structure might affect the robustness of any particular sampling methodology. Thus, we present a computational tool for generating network structures that have user-defined distributions for network properties and for key measures of interest to ecologists. The user defines the values of these measures and the tool will generate appropriate network randomizations with those properties. This tool will be used as a framework for developing a sampling methodology, although we do not present a full methodology here. We describe the method used by the tool, demonstrate its effectiveness, and discuss how the tool can now be utilized. We provide a proof-of-concept example (using the assortativity measure) of how such networks can be used, along with a simulated egocentric sampling regime, to test the level of equivalence of the sampled network to the actual network.