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Ridge, J. A., Baldwin, R. L., & Labhardt, A. M. (1981). Nature of the fast and slow refolding reactions of iron(III) cytochrome c. Biochemistry, 20(6), 1622–1630.
Abstract: The fast and slow refolding reactions of iron(III) cytochrome c (Fe(III) cyt c), previously studied by Ikai et al. (Ikai, A., Fish, W. W., & Tanford, C. (1973) J. Mol. Biol. 73, 165--184), have been reinvestigated. The fast reaction has the major amplitude (78%) and is 100-fold faster than the slow reaction in these conditions (pH 7.2, 25 degrees C, 1.75 M guanidine hydrochloride). We show here that native cyt c is the product formed in the fast reaction as well as in the slow reaction. Two probes have been used to test for formation of native cyt c. absorbance in the 695-nm band and rate of reduction of by L-ascorbate. Different unfolded species (UF, US) give rise to the fast and slow refolding reactions, as shown both by refolding assays at different times after unfolding (“double-jump” experiments) and by the formation of native cyt c in each of the fast and slow refolding reactions. Thus the fast refolding reaction is UF leads to N and the slow refolding reaction is Us leads to N, where N is native cyt c, and there is a US in equilibrium UF equilibrium in unfolded cyt c. The results are consistent with the UF in equilibrium US reaction being proline isomerization, but this has not yet been tested in detail. Folding intermediates have been detected in both reactions. In the UF leads to N reaction, the Soret absorbance change precedes the recovery of the native 695-nm band spectrum, showing that Soret absorbance monitors the formation of a folding intermediate. In the US leads to N reaction an ascorbate-reducible intermediate has been found at an early stage in folding and the Soret absorbance change occurs together with the change at 695 nm as N is formed in the final stage of folding.
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Andersson, P., Kvassman, J., Lindstrom, A., Olden, B., & Pettersson, G. (1981). Effect of NADH on the pKa of zinc-bound water in liver alcohol dehydrogenase. Eur J Biochem, 113(3), 425–433.
Abstract: Equilibrium constants for coenzyme binding to liver alcohol dehydrogenase have been determined over the pH range 10--12 by pH-jump stop-flow techniques. The binding of NADH or NAD+ requires the protonated form of an ionizing group (distinct from zinc-bound water) with a pKa of 10.4. Complex formation with NADH exhibits an additional dependence on the protonation state of an ionizing group with a pKa of 11.2. The binding of trans-N,N-dimethylaminocinnamaldehyde to the enzyme . NADH complex is prevented by ionization of the latter group. It is concluded from these results that the pKa-11.2-dependence of NADH binding most likely derives from ionization of the water molecule bound at the catalytic zinc ion of the enzyme subunit. The pKa value of 11.2 thus assigned to zinc-bound water in the enzyme . NADH complex appears to be typical for an aquo ligand in the inner-sphere ligand field provided by the zinc-binding amino acid residues in liver alcohol dehydrogenase. This means that the pKa of metal-bound water in zinc-containing enzymes can be assumed to correlate primarily with the number of negatively charged protein ligands coordinated by the active-site zinc ion.
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Saigo, S. (1981). Kinetic and equilibrium studies of alkaline isomerization of vertebrate cytochromes c. Biochim Biophys Acta, 669(1), 13–20.
Abstract: Equilibria and kinetics of alkaline isomerization of seven ferricytochromes c from vertebrates were studied by pH-titration and pH-jump methods in the pH region of 7-12. In the equilibrium behavior, no significant difference was detected among the cytochromes c, whereas marked differences in the kinetic behavior were observed. According to the kinetic behavior of the isomerization, the cytochromes c examined fall into three classes: Group I (horse, sheep, dog and pigeon cytochromes c), Group II (tuna and bonito cytochromes c) and Group III (rhesus monkey cytochrome c). The kinetic results are interpreted in terms of the sequential scheme: Neutral form in equilibrium with fast Transient form in equilibrium with slow Alkaline form where the neutral and alkaline forms are the species stable at neutral and alkaline pH, respectively, and the transient form is a kinetic intermediate. From comparison of the primary sequences of the seven cytochromes c and the classification of these cytochromes c, it is concluded that the amino acid substitution Phe/Tyr at the 46-th position has a major influence on the kinetic behavior. In Group II and III cytochromes c, the ionization of Tyr-46 is suggested to bring about loosening of the heme crevice and thus facilitate the ligand replacement involved in the isomerization.
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Boice, R. (1981). Behavioral comparability of wild and domesticated rats. Behav Genet, 11(5), 545–553.
Abstract: The oft-repeated concern for the lack of behavioral comparability of domestic rats with wild forms of Rattus norvegicus is unfounded. Laboratory rats appear to show the potential for all wild-type behaviors, including the most dramatic social postures. Moreover, domestics are capable of assuming a feral existence without difficulty, one where they readily behave in a fashion indistinguishable from wild rats. The one behavioral difference that is clearly established concerns performance in laboratory learning paradigms. The superiority of domestics in these laboratory tasks speaks more to quieting the concerns of degeneracy theorists than to problems of using domestic Norway rats as subjects representative of their species.
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Bean, P. (1981). Punishment: A Philosophical and Criminological Enquiry.
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R. A. J. Taylor. (1981). The Behavioural Basis of Redistribution I. The Delta -Model Concept. T. J. Anim. Ecol., 50(2), 573–586.
Abstract: (1) A conceptual model is developed in which spatial behaviour is density-dependent. The behaviour is classified as congregatory or migratory according to whether it results in movement towards or away from population concentrations. (2) Spatial behaviour is shown to result from both individual and population interactions. (3) The stability properties of the model are explored and it is shown how, under particular conditions, populations obeying the model have a population density regulating mechanism. (4) The similarity between the model and the potential energy curve of physics is noted, but it is emphasized that this is a behavioural not a physical model.
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Mace, G. M., Harvey, P. H., & Clutton-Brock, T. H. (1981). Brain size and ecology in small mammals. J Zool, 193(3), 333–354.
Abstract: Relative brain size (measured as gross brain size after body size effects are removed) differs systematically between families of rodents, insectivores and lagomorphs. The Sciuridae have the largest relative brain size, the Soricidae and Bathyergidae the smallest. These results are discussed and compared with previous analyses of relative brain sizes among primates and bats. These differences complicate comparisons between relative brain size across phylogenetically diverse species and attempts to relate differences in relative brain size to ecological variables. To overcome these problems, best fit relationships were estimated for each family, and values for each genus were expressed as deviations from the lines of best fit. We refer to these values as Comparative Brain Size (CBS). Differences in CBS are related to differences in habitat type (forest-dwelling genera have larger CBS' than grassland forms), in diet (folivores have smaller CBS' than generalists or insectivores, frugivores and granivores), in zonation (arboreal genera have larger CBS' than terrestrial ones) and in activity timing (nocturnal genera have larger CBS' than dirurnal ones). However, these ecological categories are interrelated and, when the effects of other ecological differences are taken into account using analyses of variance, only the differences associated with diet, and possibly habitat remain.
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Partridge, B. L. (1981). Internal dynamics and the interrelations of fish in schools. J Comp Physiol Sensory Neural Behav Physiol, 144(3), 313–325.
Abstract: The three-dimensional structure of schools of saithe (Pollachius virens) and the interactions between individuals over time were analyzed in 12,240 frames of videotape sampled at 2.7 Hz. Time series analyses of the interactions between identified individuals allowed testing of assumptions of anonymity vs. leadership in schools and investigation of the transfer of information between individuals by which collective decisions are made. Results include the following:1.Saithe match changes in both swimming direction and speed of their neighbors but correlations are greater for swimming speed. Average speed of the school does not greatly affect correlations between neighboring fish although the reaction latencies may be somewhat increased. As shown previously (Partridge et al. 1980) nearest neighbor distance (NND) decreases with increasing school velocity.2.Saithe simultaneously match the headings and swimming speeds of at least their first two nearest neighbors within the school (NN1 and NN2). Partialling out the correlation between a fish's neighbors demonstrates that a fish's correlation to his second nearest neighbor (NN2) is not simply a transitive function of mutual correlation between the NN1 and NN2.3.Several sources of individual variation in schooling performance were examined. In all respects except one, that of preferred positions within the school, saithe showed no individual differences, i.e., some were not “better schoolers” than others. Although fish in the school differed in length by up to a factor of 2.5, no size related effects in NND or nearest neighbor positioning were found.4.Single Linkage Cluster Analysis (SLCA) of the cross-correlations of fishs' swimming speeds and directions demonstrated quantitatively the existence of subgroups within schools if they contain more than 10-11 members. Subgroups acting more-or-less independently in terms of short term variations in speed and direction nonetheless remained within the school as a whole and were not often apparent to observers since members of one group interdigitated with those of another. How individuals know to which subgroup they belong remains unanswered.
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Joynson, R. B. (1981). Towards understanding relationships, by Robert A. Hinde. London: Academic, 1979, pp xii + 367. Aggressive Behavior, 7(3), 275–280.
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Bannikov Ag,. (1981). Kulan Moskau.
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