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Abbruzzetti, S., Viappiani, C., Small, J. R., Libertini, L. J., & Small, E. W. (2001). Kinetics of histidine deligation from the heme in GuHCl-unfolded Fe(III) cytochrome C studied by a laser-induced pH-jump technique. J Am Chem Soc, 123(27), 6649–6653.
Abstract: We have developed an instrumental setup that uses transient absorption to monitor protein folding/unfolding processes following a laser-induced, ultrafast release of protons from o-nitrobenzaldehyde. The resulting increase in [H(+)], which can be more than 100 microM, is complete within a few nanoseconds. The increase in [H(+)] lowers the pH of the solution from neutrality to approximately 4 at the highest laser pulse energy used. Protein structural rearrangements can be followed by transient absorption, with kinetic monitoring over a broad time range (approximately 10 ns to 500 ms). Using this pH-jump/transient absorption technique, we have examined the dissociation kinetics of non-native axial heme ligands (either histidine His26 or His33) in GuHCl-unfolded Fe(III) cytochrome c (cyt c). Deligation of the non-native ligands following the acidic pH-jump occurs as a biexponential process with different pre-exponential factors. The pre-exponential factors markedly depend on the extent of the pH-jump, as expected from differences in the pK(a) values of His26 and His33. The two lifetimes were found to depend on temperature but were not functions of either the magnitude of the pH-jump or the pre-pulse pH of the solution. The activation energies of the deligation processes support the suggestion that GuHCl-unfolded cyt c structures with non-native histidine axial ligands represent kinetic traps in unfolding.
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Gulotta, M., Gilmanshin, R., Buscher, T. C., Callender, R. H., & Dyer, R. B. (2001). Core formation in apomyoglobin: probing the upper reaches of the folding energy landscape. Biochemistry, 40(17), 5137–5143.
Abstract: An acid-destabilized form of apomyoglobin, the so-called E state, consists of a set of heterogeneous structures that are all characterized by a stable hydrophobic core composed of 30-40 residues at the intersection of the A, G, and H helices of the protein, with little other secondary structure and no other tertiary structure. Relaxation kinetics studies were carried out to characterize the dynamics of core melting and formation in this protein. The unfolding and/or refolding response is induced by a laser-induced temperature jump between the folded and unfolded forms of E, and structural changes are monitored using the infrared amide I' absorbance at 1648-1651 cm(-1) that reports on the formation of solvent-protected, native-like helix in the core and by fluorescence emission changes from apomyoglobin's Trp14, a measure of burial of the indole group of this residue. The fluorescence kinetics data are monoexponential with a relaxation time of 14 micros. However, infrared kinetics data are best fit to a biexponential function with relaxation times of 14 and 59 micros. These relaxation times are very fast, close to the limits placed on folding reactions by diffusion. The 14 micros relaxation time is weakly temperature dependent and thus represents a pathway that is energetically downhill. The appearance of this relaxation time in both the fluorescence and infrared measurements indicates that this folding event proceeds by a concomitant formation of compact secondary and tertiary structures. The 59 micros relaxation time is much more strongly temperature dependent and has no fluorescence counterpart, indicating an activated process with a large energy barrier wherein nonspecific hydrophobic interactions between helix A and the G and H helices cause some helix burial but Trp14 remains solvent exposed. These results are best fit by a multiple-pathway kinetic model when U collapses to form the various folded core structures of E. Thus, the results suggest very robust dynamics for core formation involving multiple folding pathways and provide significant insight into the primary processes of protein folding.
Keywords: Animals; Apoproteins/*chemistry; Computer Simulation; Horses; Hydrogen-Ion Concentration; Kinetics; Models, Molecular; Myoglobin/*chemistry; *Protein Folding; Protein Structure, Secondary; Protein Structure, Tertiary; Spectrometry, Fluorescence/instrumentation/methods; Thermodynamics; Tryptophan/chemistry
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Wallin, L., Strandberg, E., & Philipsson, J. (2001). Phenotypic relationship between test results of Swedish Warmblood horses as 4-year-olds and longevity. Livestock Production Science, 68(2-3), 97–105.
Abstract: The relationship between longevity and different traits scored in the Swedish Riding Horse Quality Test (RHQT) was studied to evaluate their use as predictors of survival. Data comprised 1815 Warmblood horses born between 1969 and 1982 that had participated in the RHQT as 4-year-olds. Survival information was obtained via a questionnaire sent to owners of horses that had participated in the RHQT between 1973 and 1986. All phenotypic values of traits scored at 4 years of age were adjusted for the effect of place/year (event). Survival analysis was performed taking into account censoring. Traits having significant effects on longevity were: conformation, legs (included in conformation), orthopaedic status, jumping ability, and the horses' combined classification score for dressage and jumping talents, respectively. Orthopaedic health had the greatest influence on longevity, and demonstrated the importance of judging health traits in young sports horses. The results of this study confirmed that there is a significant phenotypic relationship between many of the RHQT traits and longevity, and thus the possibility of using them as predictors of survival.
Keywords: Horse; Longevity; Survival analysis; Test traits
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Robert, C., Audigie, F., Valette, J. P., Pourcelot, P., & Denoix, J. M. (2001). Effects of treadmill speed on the mechanics of the back in the trotting saddlehorse. Equine Vet J Suppl, (33), 154–159.
Abstract: Speed related changes in trunk mechanics have not yet been investigated, although high-speed training is currently used in the horse. To evaluate the effects of speed on back kinematics and trunk muscles activity, 4 saddle horses were recorded while trotting on a horizontal treadmill at speeds ranging from 3.5 to 6 m/s. The 3-dimensional (3-D) trajectories of skin markers on the left side of the horse and the dorsal midline of the trunk were established. Electrical activity was simultaneously obtained from the longissimus dorsi (LD) and rectus abdominis (RA) muscles using surface electrodes. Ten consecutive strides were analysed for each horse at each of the 5 velocity steps. Electromyographic and kinematic data were time-standardised to the duration of the stride cycle and compared using an analysis of variance. The back extended during the first part of each diagonal stance phase when the RA was active and the back flexed during the second part of each diagonal stance phase when the LD was active. The onset and end of muscle activity came earlier in the stride cycle and muscle activity intensity increased when speed increased. The amplitude of vertical movement of the trunk and the maximal angles of flexion decreased with increasing speed, whereas the extension angles remained unchanged. This resulted in a decreased range of back flexion-extension. This study confirms that the primary role of trunk muscles is to control the stiffness of the back rather than to induce movements. Understanding the effects of speed on the back of healthy horses is a prerequisite for the prevention and treatment of back pathology.
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Hernandez, J., & Hawkins, D. L. (2001). Training failure among yearling horses. Am J Vet Res, 62(9), 1418–1422.
Abstract: OBJECTIVE: To compare financial returns between pinhooked yearling horses (ie, bought and trained for approximately 5 months with the goal of selling the horse at “2-year-olds in training” sales) that had mild or severe training failure and horses that had planned versus nonplanned training failure. ANIMALS: 40 Thoroughbred pinhooked yearling horses. PROCEDURE: During the period from September 1998 through and April 1999, 20 horses had mild training failure (1 to 11 days lost), and 20 horses had severe training failure (13 to 108 days lost). Horses were assigned to these 2 groups on the basis of frequency distribution (median) of days lost during training. Horses were also categorized on the basis of type of training failure (planned vs nonplanned training failure). The outcome of primary interest was financial return. Median financial returns were compared among groups by use of the Mann-Whitney U test. RESULTS: Median financial returns for horses that had severe training failure ($1,000) were significantly different, compared with horses that had mild training failure ($24,000). Analysis of results also indicated that median returns were significantly different among horses that had planned training failure (-$2,000; eg, horses with radiographic abnormalities detected during routine prepurchase examinations that required surgical treatment, resulting in days lost during training), compared with horses that did not ($10,000). CONCLUSIONS AND CLINICAL RELEVANCE: Training failure has an economic impact on revenues in pinhooked yearling horses. Lameness, planned training failure, respiratory disease, and ringworm were common and important causes of training failure.
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Robert, C., Valette, J. P., & Denoix, J. M. (2001). The effects of treadmill inclination and speed on the activity of three trunk muscles in the trotting horse. Equine Vet J, 33(5), 466–472.
Abstract: The purpose of this study was to evaluate the effects of speed and slope on the activity of trunk muscles. The electromyographic (EMG) activity of the splenius (Sp), longissimus dorsi (LD) and rectus abdominis (RA) muscles was recorded with surface electrodes during treadmill locomotion at trot for different combinations of speed (3.5 to 6 m/s) and slope (0 to 6%). Raw EMG signals were processed to determine activity duration, onset and end and integrated EMG (IEMG). For the 3 muscles investigated, onset and end of activity were obtained earlier in the stride cycle when speed increased. A longer duration of activity for the LD, a shorter duration for the RA and an unchanged duration for the Sp were also observed. The IEMG of the latter was poorly affected by speed, whereas it increased linearly with speed for the 2 other muscles. When treadmill inclination changed from 0 to 6%, EMG activity of the LD and RA began and ended later; a longer activity duration was noted. Temporal parameters for Sp did not change with slope. A significant and progressive increase in the IEMG of the 3 muscles was observed with increasing slope. This evaluation of the activity of trunk muscles provides objective data for the use of speed or slope in training programmes.
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Schwartz, B. L., & Evans, S. (2001). Episodic memory in primates. Am. J. Primatol., 55(2), 71–85.
Abstract: Episodic memory refers to a system of memory with the capacity to recollect specific events from an individual's life. Some psychologists have suggested that episodic memory is a uniquely human phenomenon. We challenge that idea and present evidence that great apes and other primates may possess episodic-like memory. We review criteria developed to assess episodic-like memory in nonhumans, and how they apply to primates. In particular, we discuss the criteria of Clayton et al. [2001], who stated that episodic-like memory is based on the retrieval of multiple and integrated components of an event. We then review eight studies examining memory in great apes and apply the Clayton et al. criteria to each of them. We summarize the evidence that is compatible with the existence of episodic-like memory, although none of the data completely satisfy the Clayton et al. criteria. Morover, feelings of pastness and feelings of confidence, which mark episodic memory in humans, have not been empirically addressed in nonhuman primates. Future studies should be directed at these aspects of memory in primates. We speculate on the functional significance of episodic memory in nonhuman primates.
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Morley, K. I., & Montgomery, G. W. (2001). The genetics of cognitive processes: candidate genes in humans and animals. Behav Genet, 31(6), 511–531.
Abstract: It has been hypothesized that numerous genes contribute to individual variation in human cognition. An extensive search of the scientific literature was undertaken to identify candidate genes which might contribute to this complex trait. A list of over 150 candidate genes that may influence some aspect of cognition was compiled. Some genes are particularly strong candidates based on evidence for involvement in cognitive processes in humans, mice, and Drosophila melanogaster. This survey confirms that many genes are associated with cognitive variation and highlights the potential importance of animal models in the study of human cognition.
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Bouchard, T. J. J., & Loehlin, J. C. (2001). Genes, evolution, and personality. Behav Genet, 31(3), 243–273.
Abstract: There is abundant evidence, some of it reviewed in this paper, that personality traits are substantially influenced by the genes. Much remains to be understood about how and why this is the case. We argue that placing the behavior genetics of personality in the context of epidemiology, evolutionary psychology, and neighboring psychological domains such as interests and attitudes should help lead to new insights. We suggest that important methodological advances, such as measuring traits from multiple viewpoints, using large samples, and analyzing data by modern multivariate techniques, have already led to major changes in our view of such perennial puzzles as the role of “unshared environment” in personality. In the long run, but not yet, approaches via molecular genetics and brain physiology may also make decisive contributions to understanding the heritability of personality traits. We conclude that the behavior genetics of personality is alive and flourishing but that there remains ample scope for new growth and that much social science research is seriously compromised if it does not incorporate genetic variation in its explanatory models.
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Giulotto, E. (2001). Will horse genetics create better champions? Trends Genet., 17, 166.
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