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	Author	Tebbich Sabine; Griffin Andrea S.; Peschl Markus F.; Sterelny Kim
	Title	From mechanisms to function: an integrated framework of animal innovation			Type	Journal Article
	Year	2016	Publication	Philosophical Transactions of the Royal Society B: Biological Sciences	Abbreviated Journal	Philos Trans R Soc Lond B Biol Sci
	Volume	371	Issue	1690	Pages	20150195
	Keywords
	Abstract	Animal innovations range from the discovery of novel food types to the invention of completely novel behaviours. Innovations can give access to new opportunities, and thus enable innovating agents to invade and create novel niches. This in turn can pave the way for morphological adaptation and adaptive radiation. The mechanisms that make innovations possible are probably as diverse as the innovations themselves. So too are their evolutionary consequences. Perhaps because of this diversity, we lack a unifying framework that links mechanism to function. We propose a framework for animal innovation that describes the interactions between mechanism, fitness benefit and evolutionary significance, and which suggests an expanded range of experimental approaches. In doing so, we split innovation into factors (components and phases) that can be manipulated systematically, and which can be investigated both experimentally and with correlational studies. We apply this framework to a selection of cases, showing how it helps us ask more precise questions and design more revealing experiments.
	Address
	Corporate Author				Thesis
	Publisher	Royal Society	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	doi: 10.1098/rstb.2015.0195			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	6557
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	Author	Mann Janet; Patterson Eric M.
	Title	Tool use by aquatic animals			Type	Journal Article
	Year	2013	Publication	Philosophical Transactions of the Royal Society B: Biological Sciences	Abbreviated Journal	Phil. Trans. Biol. Sci.
	Volume	368	Issue	1630	Pages	20120424
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher	Royal Society	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	doi: 10.1098/rstb.2012.0424			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	6579
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	Author	Marr, I.; Preisler, V.; Farmer, K.; Stefanski, V.; Krueger, K.
	Title	Non-invasive stress evaluation in domestic horses (Equus caballus): impact of housing conditions on sensory laterality and immunoglobulin A			Type	Journal Article
	Year	2020	Publication	Royal Society Open Science	Abbreviated Journal	Royal Society Open Science
	Volume	7	Issue	2	Pages	191994
	Keywords
	Abstract	The study aimed to evaluate sensory laterality and concentration of faecal immunoglobulin A (IgA) as non-invasive measures of stress in horses by comparing them with the already established measures of motor laterality and faecal glucocorticoid metabolites (FGMs). Eleven three-year-old horses were exposed to known stressful situations (change of housing, initial training) to assess the two new parameters. Sensory laterality initially shifted significantly to the left and faecal FGMs were significantly increased on the change from group to individual housing and remained high through initial training. Motor laterality shifted significantly to the left after one week of individual stabling. Faecal IgA remained unchanged throughout the experiment. We therefore suggest that sensory laterality may be helpful in assessing acute stress in horses, especially on an individual level, as it proved to be an objective behavioural parameter that is easy to observe. Comparably, motor laterality may be helpful in assessing long-lasting stress. The results indicate that stress changes sensory laterality in horses, but further research is needed on a larger sample to evaluate elevated chronic stress, as it was not clear whether the horses of the present study experienced compromised welfare, which it has been proposed may affect faecal IgA.
	Address
	Corporate Author				Thesis
	Publisher	Royal Society	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes	doi: 10.1098/rsos.191994			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	6608
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	Author	Steinhoff-Wagner, J.
	Title	Coat Clipping of Horses: A Survey			Type	Journal Article
	Year	2019	Publication	Journal of Applied Animal Welfare Science	Abbreviated Journal	Journal of Applied Animal Welfare Science
	Volume	22	Issue	2	Pages	171-187
	Keywords	Equine, thermoregulation, shaving, winter pelage removal
	Abstract	Coat clipping is a common practice in sport horses; however, timing, purpose, technique, and clips vary widely, as do the management and feeding of a clipped horse. The aim of this study was to collect data regarding common clipping practices. A questionnaire was published online in Germany and contained 32 questions. Four hundred ninety-eight people answered at least one question, and 373 individuals (7% male, 93% female; ages 14–59 years) completed all the questions. Clipped horses were predominantly used as sport horses (68%), and they were either clipped immediately before or during the winter season (88%) or year-round (7%). The clipping date was scheduled according to hair length (52%), sweat amount (47%), and drying time (47%). Participants primarily used two clips: the hunter clip and the blanket clip, both without clipping the head (23% each). The majority of the clipped horses wore a blanket day and night (> 90%). Future studies with observations in the field are needed to support survey data in an effort to develop welfare recommendations for clipping practices utilized with horses.
	Address
	Corporate Author				Thesis
	Publisher	Routledge	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN	1088-8705	ISBN		Medium
	Area		Expedition		Conference
	Notes	doi: 10.1080/10888705.2018.1454319			Approved	no
	Call Number	Equine Behaviour @ team @			Serial	6613
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	Author
	Title	R Foundation for Statistical Computing			Type	Book Whole
	Year	2013	Publication		Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher	R Foundation for Statistical Computing	Place of Publication	Vienna, Austria	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes				Approved	no
	Call Number	Equine Behaviour @ team @ ref80			Serial	6295
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	Author	Core Development Team, R.
	Title	R: a language and environment for statistical computing			Type	Book Whole
	Year	2011	Publication		Abbreviated Journal
	Volume		Issue		Pages
	Keywords
	Abstract
	Address
	Corporate Author				Thesis
	Publisher	R foundation for statistical computing	Place of Publication	Vienna, Austria	Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes				Approved	no
	Call Number	Equine Behaviour @ team @ Core Development Team2011			Serial	6489
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	Author	Petersen, J.L.; Mickelson, J.R.; Cothran, E.G.; Andersson, L.S.; Axelsson, J.; Bailey, E.; Bannasch, D.; Binns, M.M.; Borges, A.S.; Brama, P.; da Câmara Machado, A.; Distl, O.; Felicetti, M.; Fox-Clipsham, L.; Graves, K.T.; Guérin, G.; Haase, B.; Hasegawa, T.; Hemmann, K.; Hill, E.W.; Leeb, T.; Lindgren, G.; Lohi, H.; Lopes, M.S.; McGivney, B.A.; Mikko, S.; Orr, N.; Penedo, M.C.T.; Piercy, R.J.; Raekallio, M.; Rieder, S.; Røed, K.H.; Silvestrelli, M.; Swinburne, J.; Tozaki, T.; Vaudin, M.; M. Wade, C.; McCue, M.E.
	Title	Genetic Diversity in the Modern Horse Illustrated from Genome-Wide SNP Data			Type	Journal Article
	Year	2013	Publication	Plos One	Abbreviated Journal	Plos One
	Volume	8	Issue	1	Pages	e54997
	Keywords
	Abstract	Horses were domesticated from the Eurasian steppes 5,000-6,000 years ago. Since then, the use of horses for transportation, warfare, and agriculture, as well as selection for desired traits and fitness, has resulted in diverse populations distributed across the world, many of which have become or are in the process of becoming formally organized into closed, breeding populations (breeds). This report describes the use of a genome-wide set of autosomal SNPs and 814 horses from 36 breeds to provide the first detailed description of equine breed diversity. FST calculations, parsimony, and distance analysis demonstrated relationships among the breeds that largely reflect geographic origins and known breed histories. Low levels of population divergence were observed between breeds that are relatively early on in the process of breed development, and between those with high levels of within-breed diversity, whether due to large population size, ongoing outcrossing, or large within-breed phenotypic diversity. Populations with low within-breed diversity included those which have experienced population bottlenecks, have been under intense selective pressure, or are closed populations with long breed histories. These results provide new insights into the relationships among and the diversity within breeds of horses. In addition these results will facilitate future genome-wide association studies and investigations into genomic targets of selection.
	Address
	Corporate Author				Thesis
	Publisher	Public Library of Science	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes				Approved	no
	Call Number	Equine Behaviour @ team @			Serial	6214
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	Author	Pirault, P.; Danvy, S.; Verrier, E.; Leroy, G.
	Title	Genetic Structure and Gene Flows within Horses: A Genealogical Study at the French Population Scale			Type	Journal Article
	Year	2013	Publication	Plos One	Abbreviated Journal	Plos One
	Volume	8	Issue	4	Pages	e61544
	Keywords
	Abstract	Since horse breeds constitute populations submitted to variable and multiple outcrossing events, we analyzed the genetic structure and gene flows considering horses raised in France. We used genealogical data, with a reference population of 547,620 horses born in France between 2002 and 2011, grouped according to 55 breed origins. On average, individuals had 6.3 equivalent generations known. Considering different population levels, fixation index decreased from an overall species FIT of 1.37%, to an average of -0.07% when considering the 55 origins, showing that most horse breeds constitute populations without genetic structure. We illustrate the complexity of gene flows existing among horse breeds, a few populations being closed to foreign influence, most, however, being submitted to various levels of introgression. In particular, Thoroughbred and Arab breeds are largely used as introgression sources, since those two populations explain together 26% of founder origins within the overall horse population. When compared with molecular data, breeds with a small level of coancestry also showed low genetic distance; the gene pool of the breeds was probably impacted by their reproducer exchanges.
	Address
	Corporate Author				Thesis
	Publisher	Public Library of Science	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes				Approved	no
	Call Number	Equine Behaviour @ team @			Serial	6215
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	Author	Clayton, H.M.; Hampson, A.; Fraser, P.; White, A.; Egenvall, A.
	Title	Comparison of rider stability in a flapless saddle versus a conventional saddle			Type	Journal Article
	Year	2018	Publication	Plos One	Abbreviated Journal	Plos One
	Volume	13	Issue	6	Pages	e0196960
	Keywords
	Abstract	The purpose of a saddle is to improve the rider's safety, security, and comfort, while distributing the forces exerted by the rider and saddle over a large area of the horse's back without focal pressure points. This study investigates the effects on rider stability of an innovative saddle design that differs from a conventional saddle in having no flaps. Five horses were ridden by their regular rider in their usual saddle and in a flapless saddle. A pressure mat (60 Hz) placed between the saddle and the horse's back was used to determine the position of the center of pressure, which represents the centroid of pressure distribution on the horse's back. Data were recorded as five horses were ridden at collected and extended walk, trot and canter in a straight line. Data strings were split into strides with 5 strides analysed per horse/gait/type. For each stride the path of the rider's center of pressure was plotted, maximal and minimal values in the anteroposterior and mediolateral directions were extracted, and ranges of motion in anteroposterior and mediolateral directions were calculated. Differences between the conventional and flapless saddles were analysed using mixed models ANOVA. Speed and stride length of each gait did not differ between saddles. Compared with the conventional saddle, the flapless saddle was associated with significant reductions in range of motion of the rider's center of pressure in the mediolateral direction in all gaits and in the anteroposterior direction in collected trot, extended trot and extended canter. The improved stability was thought to result from the absence of saddle flaps allowing the rider's thighs to lie in more adducted positions, which facilitated the action of the lumbopelvic-hip musculature in stabilizing and controlling translations and rotations of the pelvis and trunk. The closer contact between rider and horse may also have augmented the transfer of haptic information.
	Address
	Corporate Author				Thesis
	Publisher	Public Library of Science	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes				Approved	no
	Call Number	Equine Behaviour @ team @			Serial	6423
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	Author	Santiago-Avila, F.J.; Cornman, A.M.; Treves, A.
	Title	Killing wolves to prevent predation on livestock may protect one farm but harm neighbors			Type	Journal Article
	Year	2018	Publication	Plos One	Abbreviated Journal	Plos One
	Volume	13	Issue	1	Pages	e0189729
	Keywords
	Abstract	Large carnivores, such as gray wolves, Canis lupus, are difficult to protect in mixed-use landscapes because some people perceive them as dangerous and because they sometimes threaten human property and safety. Governments may respond by killing carnivores in an effort to prevent repeated conflicts or threats, although the functional effectiveness of lethal methods has long been questioned. We evaluated two methods of government intervention following independent events of verified wolf predation on domestic animals (depredation) in the Upper Peninsula of Michigan, USA between 1998-2014, at three spatial scales. We evaluated two intervention methods using log-rank tests and conditional Cox recurrent event, gap time models based on retrospective analyses of the following quasi-experimental treatments: (1) selective killing of wolves by trapping near sites of verified depredation, and (2) advice to owners and haphazard use of non-lethal methods without wolf-killing. The government did not randomly assign treatments and used a pseudo-control (no removal of wolves was not a true control), but the federal permission to intervene lethally was granted and rescinded independent of events on the ground. Hazard ratios suggest lethal intervention was associated with an insignificant 27% lower risk of recurrence of events at trapping sites, but offset by an insignificant 22% increase in risk of recurrence at sites up to 5.42 km distant in the same year, compared to the non-lethal treatment. Our results do not support the hypothesis that Michigan's use of lethal intervention after wolf depredations was effective for reducing the future risk of recurrence in the vicinities of trapping sites. Examining only the sites of intervention is incomplete because neighbors near trapping sites may suffer the recurrence of depredations. We propose two new hypotheses for perceived effectiveness of lethal methods: (a) killing predators may be perceived as effective because of the benefits to a small minority of farmers, and (b) if neighbors experience side-effects of lethal intervention such as displaced depredations, they may perceive the problem growing and then demand more lethal intervention rather than detecting problems spreading from the first trapping site. Ethical wildlife management guided by the “best scientific and commercial data available” would suggest suspending the standard method of trapping wolves in favor of non-lethal methods (livestock guarding dogs or fladry) that have been proven effective in preventing livestock losses in Michigan and elsewhere.
	Address
	Corporate Author				Thesis
	Publisher	Public Library of Science	Place of Publication		Editor
	Language		Summary Language		Original Title
	Series Editor		Series Title		Abbreviated Series Title
	Series Volume		Series Issue		Edition
	ISSN		ISBN		Medium
	Area		Expedition		Conference
	Notes				Approved	no
	Call Number	Equine Behaviour @ team @			Serial	6502
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