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Author |
Hagen, S.J.; Eaton, W.A. |
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Title |
Two-state expansion and collapse of a polypeptide |
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Journal Article |
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Year |
2000 |
Publication |
Journal of Molecular Biology |
Abbreviated Journal |
J Mol Biol |
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Volume |
301 |
Issue |
4 |
Pages |
1019-1027 |
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Keywords |
Animals; Computer Simulation; Cytochrome c Group/*chemistry/*metabolism; Horses; Kinetics; Lasers; Models, Chemical; Peptides/*chemistry/*metabolism; Protein Conformation; Protein Denaturation; *Protein Folding; Spectrometry, Fluorescence; Temperature; Thermodynamics |
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Abstract |
The initial phase of folding for many proteins is presumed to be the collapse of the polypeptide chain from expanded to compact, but still denatured, conformations. Theory and simulations suggest that this collapse may be a two-state transition, characterized by barrier-crossing kinetics, while the collapse of homopolymers is continuous and multi-phasic. We have used a laser temperature-jump with fluorescence spectroscopy to measure the complete time-course of the collapse of denatured cytochrome c with nanosecond time resolution. We find the process to be exponential in time and thermally activated, with an apparent activation energy approximately 9 k(B)T (after correction for solvent viscosity). These results indicate that polypeptide collapse is kinetically a two-state transition. Because of the observed free energy barrier, the time scale of polypeptide collapse is dramatically slower than is predicted by Langevin models for homopolymer collapse. |
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Laboratory of Chemical Physics, NIDDK, National Institutes of Health, Building 5, Bethesda, MD, 20892-0520, USA |
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0022-2836 |
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PMID:10966803 |
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no |
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Call Number |
Equine Behaviour @ team @ |
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3790 |
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Author |
Conradt, L.; Roper, T.J. |
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Title |
Group decision-making in animals |
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Journal Article |
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Year |
2003 |
Publication |
Nature |
Abbreviated Journal |
Nature |
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Volume |
421 |
Issue |
6919 |
Pages |
155-158 |
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Keywords |
Animals; Behavior, Animal/*physiology; *Decision Making; Democracy; Group Processes; *Models, Biological; Population Density; Social Behavior |
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Abstract |
Groups of animals often need to make communal decisions, for example about which activities to perform, when to perform them and which direction to travel in; however, little is known about how they do so. Here, we model the fitness consequences of two possible decision-making mechanisms: 'despotism' and 'democracy'. We show that under most conditions, the costs to subordinate group members, and to the group as a whole, are considerably higher for despotic than for democratic decisions. Even when the despot is the most experienced group member, it only pays other members to accept its decision when group size is small and the difference in information is large. Democratic decisions are more beneficial primarily because they tend to produce less extreme decisions, rather than because each individual has an influence on the decision per se. Our model suggests that democracy should be widespread and makes quantitative, testable predictions about group decision-making in non-humans. |
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Address |
School of Biological Sciences, University of Sussex, Brighton BN1 9QG, UK. l.conradt@sussex.ac.uk |
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0028-0836 |
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PMID:12520299 |
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Call Number |
Equine Behaviour @ team @ |
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5136 |
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Author |
Zhou, W.-X.; Sornette, D.; Hill, R.A.; Dunbar, R.I.M. |
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Title |
Discrete hierarchical organization of social group sizes |
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Journal Article |
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Year |
2005 |
Publication |
Proceedings. Biological sciences / The Royal Society |
Abbreviated Journal |
Proc Biol Sci |
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Volume |
272 |
Issue |
1561 |
Pages |
439-444 |
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Keywords |
Anthropology, Cultural; *Group Structure; Humans; *Models, Biological; *Social Behavior; *Social Environment |
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Abstract |
The 'social brain hypothesis' for the evolution of large brains in primates has led to evidence for the coevolution of neocortical size and social group sizes, suggesting that there is a cognitive constraint on group size that depends, in some way, on the volume of neural material available for processing and synthesizing information on social relationships. More recently, work on both human and non-human primates has suggested that social groups are often hierarchically structured. We combine data on human grouping patterns in a comprehensive and systematic study. Using fractal analysis, we identify, with high statistical confidence, a discrete hierarchy of group sizes with a preferred scaling ratio close to three: rather than a single or a continuous spectrum of group sizes, humans spontaneously form groups of preferred sizes organized in a geometrical series approximating 3-5, 9-15, 30-45, etc. Such discrete scale invariance could be related to that identified in signatures of herding behaviour in financial markets and might reflect a hierarchical processing of social nearness by human brains. |
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State Key Laboratory of Chemical Reaction Engineering, East China University of Science and Technology, Shanghai 200237, China |
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0962-8452 |
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PMID:15734699 |
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no |
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Call Number |
refbase @ user @ |
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549 |
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Author |
Curtis, S.E.; Stricklin, W.R. |
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Title |
The importance of animal cognition in agricultural animal production systems: an overview |
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Journal Article |
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Year |
1991 |
Publication |
Journal of Animal Science |
Abbreviated Journal |
J. Anim Sci. |
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Volume |
69 |
Issue |
12 |
Pages |
5001-5007 |
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Keywords |
*Agriculture; Animal Population Groups/*psychology; *Animal Welfare; Animals; *Behavior, Animal; *Cognition; Heat; Helplessness, Learned; Housing, Animal/standards; Immobilization; Nesting Behavior; Pain/psychology/veterinary |
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To describe and then fulfill agricultural animals' needs, we must learn more about their fundamental psychological and behavioral processes. How does this animal feel? Is that animal suffering? Will we ever be able to know these things? Scientists specializing in animal cognition say that there are numerous problems but that they can be overcome. Recognition by scientists of the notion of animal awareness has been increasing in recent years, because of the work of Griffin and others. Feeling, thinking, remembering, and imagining are cognitive processes that are factors in the economic and humane production of agricultural animals. It has been observed that the animal welfare debate depends on two controversial questions: Do animals have subjective feelings? If they do, can we find indicators that reveal them? Here, indirect behavioral analysis approaches must be taken. Moreover, the linear additivity of several stressor effects on a variety of animal traits suggests that some single phenomenon is acting as a “clearinghouse” for many or all of the stresses acting on an animal at any given time, and this phenomenon might be psychological stress. Specific situations animals may encounter in agricultural production settings are discussed with respect to the animals' subjective feelings. |
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University of Illinois, Urbana 61801 |
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0021-8812 |
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Notes |
PMID:1808193 |
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no |
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Call Number |
Equine Behaviour @ team @ |
Serial |
2754 |
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Author |
Brosnan, S.F.; Schiff, H.C.; de Waal, F.B.M. |
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Title |
Tolerance for inequity may increase with social closeness in chimpanzees |
Type |
Journal Article |
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Year |
2005 |
Publication |
Proceedings. Biological sciences / The Royal Society |
Abbreviated Journal |
Proc Biol Sci |
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Volume |
272 |
Issue |
1560 |
Pages |
253-258 |
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Keywords |
Analysis of Variance; Animals; *Attitude; Group Processes; Pan troglodytes/*psychology; Reward; *Social Behavior; Socioeconomic Factors |
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Abstract |
Economic decision-making depends on our social environment. Humans tend to respond differently to inequity in close relationships, yet we know little about the potential for such variation in other species. We examine responses to inequity in several groups of chimpanzees (Pan troglodytes) in a paradigm similar to that used previously in capuchin monkeys (Cebus apella). We demonstrate that, like capuchin monkeys, chimpanzees show a response to inequity of rewards that is based upon the partner receiving the reward rather than the presence of the reward alone. However, we also found a great amount of variation between groups tested, indicating that chimpanzees, like people, respond to inequity in a variable manner, which we speculate could be caused by such variables as group size, the social closeness of the group (as reflected in length of time that the group has been together) and group-specific traditions. |
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Address |
Yerkes National Primate Research Center, Emory University, 954 North Gatewood Drive, Atlanta, GA 30329, USA. sbrosna@emory.edu |
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0962-8452 |
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PMID:15705549 |
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Call Number |
refbase @ user @ |
Serial |
169 |
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