Abstract: Predation on livestock is a cause of serious and long-lasting conflict between farmers and wildlife, promoting negative public attitudes and endangering conservation of large carnivores. However, while large carnivores, especially the grey wolf (Canis lupus), are often blamed for killing sheep and other farm animals, free-ranging dogs may also act as predators. To develop appropriate measures for livestock protection, reliable methods for identifying predator species are critical. Identification of predators from visual examination of livestock wounds can be ambiguous and genetic analysis is strongly preferable for accurate species determination. To estimate the proportion of wolves and dogs implicated in sheep predation, we developed a sensitive genetic assay to distinguish between wolves and domestic dogs. A total of 183 predator saliva samples collected from killed sheep in Estonia were analysed. The assay identified the predator species in 143 cases (78%). Sheep were most often killed by wolves (81%); however, predation by dogs was substantial (15%). We compared the molecular results with field observations conducted by local environmental officials and recorded some disagreement, with the latter underestimating the role of dogs. As predator saliva samples collected from prey are often of poor quality, we suggest using mitochondrial DNA as a primary tool to maximise the number of successfully analysed samples. We also suggest adopting forensic DNA analysis more widely in livestock predation assessments as a legislative measure since misidentification that is biased against wolves can be counterproductive for conservation by enhancing conflict with society and leading to increased culling and poaching.

Abstract: Since horse breeds constitute populations submitted to variable and multiple outcrossing events, we analyzed the genetic structure and gene flows considering horses raised in France. We used genealogical data, with a reference population of 547,620 horses born in France between 2002 and 2011, grouped according to 55 breed origins. On average, individuals had 6.3 equivalent generations known. Considering different population levels, fixation index decreased from an overall species FIT of 1.37%, to an average of -0.07% when considering the 55 origins, showing that most horse breeds constitute populations without genetic structure. We illustrate the complexity of gene flows existing among horse breeds, a few populations being closed to foreign influence, most, however, being submitted to various levels of introgression. In particular, Thoroughbred and Arab breeds are largely used as introgression sources, since those two populations explain together 26% of founder origins within the overall horse population. When compared with molecular data, breeds with a small level of coancestry also showed low genetic distance; the gene pool of the breeds was probably impacted by their reproducer exchanges.

Abstract: Predation on livestock is a source of human-wildlife conflicts and can undermine the conservation of large carnivores. To design effective mitigation strategies, it is important to understand the determinants of predation across livestock species, which often differ in husbandry practices, vulnerability to predators and economic value. Moreover, attention should be given to both predation occurrence and intensity, because these can have different spatial patterns and predictors. We used spatial risk modelling to quantify factors affecting wolf predation on five livestock species in Portugal. Within the 1619 parishes encompassing the entire wolf range in the country, the national wolf compensation scheme recorded 17,670 predation events in 2009-2015, each involving one or more livestock species: sheep (31.7%), cattle (27.7%), goats (26.8%), horses (14.8%) and donkeys (3.2%). Models built with 2009-2013 data and validated with 2014-2015 data, showed a shared general pattern of predation probability on each species increasing with its own density and proximity to wolf packs. For some species there were positive relations with the density of other livestock species, and with habitat variables such as altitude, and land cover by shrubland and natural pastures. There was also a general pattern for predation intensity on each species increasing with its own density, while proximity to wolf packs had no significant effects. Predation intensity on goats, cattle and horses increased with the use of communal versus private pastures. Our results suggest that although predation may occur wherever wolves coexist with livestock species, high predation intensity is mainly restricted to particular areas where husbandry practices increase the vulnerability of animals, and this is where mitigation efforts should concentrate.

Abstract: Während einer fünftägigen Gotthardüberquerung im Sommer 2016 haben drei Maultiere als Tragtiere mit einer Gepäcklast von je 80 kg rund 94,46 Kilometer und 3�364 Höhenmeter bewältigt. Die Leistungsanforderung wurde anhand der Erholungswerte der Vitalparameter Herzfrequenz, Atemfrequenz und Körpertemperatur, sowie durch kontinuierliche Herzfrequenzmessung während der Belastung evaluiert. Die Bestimmung der Glucokortikoid- Metabolit Konzentration im Kot diente zur Einschätzung des Stresslevels der drei Maultiere. Die Erholungswerte der Herzfrequenzen der drei Maultiere lagen während allen Trekkingetappen in einem Bereich, der nicht auf eine Leistungsüberforderung schliessen liess. Anhand der kontinuierlichen Herzfrequenzaufzeichnung bei einem der Maultiere konnte gezeigt werden, dass die physische Leistungsanforderung im Ausdauerbereich lag. Wie als normale physiologische Reaktion des Körpers nach einer fünftägigen körperlichen Belastung erwartet, stieg Stresslevel gemessen an den Glucokortikoid- Metaboliten im Kot gegen Ende des Trecks bei allen Maultieren an. In der vorliegenden Studie konnte gezeigt werden, dass die Maultiere während des Gotthardtrecks ausdauernd belastbar waren, ohne durch die Anstrengung beeinträchtigt zu sein, die schon historisch von Maultieren abverlangt wurde.[
Durant une traversée du Gothard de cinq jours pendant l�été 2016, trois mulets ont été employés comme animaux de bât pour porter une charge de 80 kg sur 94,46 km, avec un dénivelé de 3364 m. Les exigences de performance ont été évaluées à partir des valeurs de récupération des paramètres vitaux (fréquence cardiaque, fréquence respiratoire et température corporelle) et de la fréquence cardiaque durant l�effort. La concentration en métabolites glucocorticoïdes dans le crottin a permis d�estimer le niveau de stress des trois animaux. Durant toute la durée du trek, les valeurs de récupération de la fréquence cardiaque des trois mulets étaient comprises dans un intervalle n�indiquant aucun effort excessif. La mesure constante des pulsations cardiaques a montré que l�intensité des performances physiques de ces animaux ne sortait pas de leur zone d�endurance. Comme on pouvait s�y attendre, le niveau de stress mesuré par le biais des métabolites glucocorticoïdes a augmenté chez tous les mulets à la fin du trek, réaction physiologique normale du corps après un effort de cinq jours. La présente étude a montré que durant un trek sur le Gothard, les mulets ont fait preuve d�endurance et de résistance, sans altération due à l�effort que l�on exige traditionnellement de leur part.][Nell�estate del 2016 tre muli impiegati come animali da soma hanno attraversato il Gottardo portando un carico di 80 kg ciascuno e percorrendo in cinque giorni un percorso di circa 94,46 chilometri con un dislivello di 3364 metri. La prestazione è stata valutata sulla base dei valori di recupero dei parametri vitali (frequenza cardiaca, frequenza respiratoria, temperatura corporea) e misurando costantemente la frequenza cardiaca sotto sforzo. Il livello di stress dei tre muli è stato valutato in funzione della concentrazione di metaboliti glicocorticoidi riscontrata nelle feci. In tutte le tappe del trekking i valori di recupero della frequenza cardiaca registrati nei muli rientravano in un intervallo che non lasciava supporre un sovraccarico. Sulla base della registrazione costante della frequenza cardiaca di uno dei tre muli è stato possibile dimostrare che l�intensità dello sforzo fisico non superava il loro intervallo di resistenza. Come previsto, verso la fine del trekking la concentrazione di metaboliti glicocorticoidi nelle feci di tutti e tre i muli indicava un aumento del livello di stress; si tratta di una reazione fisiologica normale dopo uno sforzo fisico di cinque giorni. Questo studio ha dimostrato che lo sforzo sopportato dai muli per portare un carico attraverso il Gottardo, un compito da secoli richiesto a questi animali, rientrava nel loro intervallo di resistenza e non ha avuto ripercussioni negative sul loro fisico.][In the summer of 2016, three pack mules, each carrying a load weighing 80kg, accompanied a 94.46km trek across the Gotthard Pass with a total altitude difference of 3,364m. The mules� performances were evaluated by measuring vital recovery parameters such as heart- and respiratory rates and body temperature, and by continuous heartrate monitoring during the trek. The stress levels of the animals were estimated by determining glucocorticoid metabolite levels in their faeces. Throughout the trekking days, recovery heartrates lay within a range which indicated that the animals were not being overworked. The continuous heartrate monitoring of one of the mules showed that its physical performance lay within the endurance zone. As expected, glucocorticoid metabolite levels were elevated in the faeces of all the mules � a normal physiological response after five consecutive days of exercise. The study shows the mules as being capable of performing at an endurance level during the Gotthard trek with no adverse affects on their health � a performance which was historically expected of the animals.]

Abstract: Horses were domesticated from the Eurasian steppes 5,000-6,000 years ago. Since then, the use of horses for transportation, warfare, and agriculture, as well as selection for desired traits and fitness, has resulted in diverse populations distributed across the world, many of which have become or are in the process of becoming formally organized into closed, breeding populations (breeds). This report describes the use of a genome-wide set of autosomal SNPs and 814 horses from 36 breeds to provide the first detailed description of equine breed diversity. FST calculations, parsimony, and distance analysis demonstrated relationships among the breeds that largely reflect geographic origins and known breed histories. Low levels of population divergence were observed between breeds that are relatively early on in the process of breed development, and between those with high levels of within-breed diversity, whether due to large population size, ongoing outcrossing, or large within-breed phenotypic diversity. Populations with low within-breed diversity included those which have experienced population bottlenecks, have been under intense selective pressure, or are closed populations with long breed histories. These results provide new insights into the relationships among and the diversity within breeds of horses. In addition these results will facilitate future genome-wide association studies and investigations into genomic targets of selection.