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Hofmeester, T.R.; Cromsigt, J.P.G.M.; Odden, J.; Andrén, H.; Kindberg, J.; Linnell, J.D.C. |
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Title |
Framing pictures: A conceptual framework to identify and correct for biases in detection probability of camera traps enabling multi-species comparison |
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Journal Article |
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Year |
2019 |
Publication |
Ecology and Evolution |
Abbreviated Journal |
Ecol Evol |
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Keywords |
animal characteristics; detectability; environmental variables; mammal monitoring; reuse of data; trail camera |
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Abstract Obtaining reliable species observations is of great importance in animal ecology and wildlife conservation. An increasing number of studies use camera traps (CTs) to study wildlife communities, and an increasing effort is made to make better use and reuse of the large amounts of data that are produced. It is in these circumstances that it becomes paramount to correct for the species- and study-specific variation in imperfect detection within CTs. We reviewed the literature and used our own experience to compile a list of factors that affect CT detection of animals. We did this within a conceptual framework of six distinct scales separating out the influences of (a) animal characteristics, (b) CT specifications, (c) CT set-up protocols, and (d) environmental variables. We identified 40 factors that can potentially influence the detection of animals by CTs at these six scales. Many of these factors were related to only a few overarching parameters. Most of the animal characteristics scale with body mass and diet type, and most environmental characteristics differ with season or latitude such that remote sensing products like NDVI could be used as a proxy index to capture this variation. Factors that influence detection at the microsite and camera scales are probably the most important in determining CT detection of animals. The type of study and specific research question will determine which factors should be corrected. Corrections can be done by directly adjusting the CT metric of interest or by using covariates in a statistical framework. Our conceptual framework can be used to design better CT studies and help when analyzing CT data. Furthermore, it provides an overview of which factors should be reported in CT studies to make them repeatable, comparable, and their data reusable. This should greatly improve the possibilities for global scale analyses of (reused) CT data. |
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John Wiley & Sons, Ltd |
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2045-7758 |
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doi: 10.1002/ece3.4878 |
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Equine Behaviour @ team @ |
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6518 |
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Author |
Schnabel, C.L.; Babasyan, S.; Freer, H.; Wagner, B. |
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Title |
Quantification of equine immunoglobulin A in serum and secretions by a fluorescent bead-based assay |
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Journal Article |
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Year |
2017 |
Publication |
Veterinary Immunology and Immunopathology |
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188 |
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Pages |
12-20 |
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Keywords |
Horse; Immunoglobulin A; Monoclonal antibody; Fluorescent bead-based assay; Mucosal secretion |
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Abstract |
Abstract Only few quantitative reports exist about the concentrations and induction of immunoglobulin A (IgA) in mucosal secretions of horses. Despite this, it is widely assumed that IgA is the predominant immunoglobulin on mucosal surfaces in the horse. Here, two new monoclonal antibodies (mAbs) against equine IgA, clones 84-1 and 161-1, were developed and characterized in detail. Both IgA mAbs specifically bound monomeric and dimeric equine IgA in different applications, such as Western blots and fluorescent bead-based assays. Cross-reactivity with other equine immunoglobulin isotypes was not observed. The new IgA mAb 84-1 was used in combination with the previously characterized anti-equine IgA mAb BVS2 for the development and validation of a fluorescent bead-based assay to quantify total IgA in equine serum and various secretions. The IgA assay's linear detection ranged from 64 pg/ml to 1000 ng/ml. For the quantification of IgA in serum or in secretions an IgA standard was purified from serum or nasal wash fluid (secretory IgA), respectively. The different standards were needed for accurate IgA quantification in the respective samples taking the different signal intensities of monomeric and dimeric IgA on the florescent bead-based assay into account. IgA was quantified by the bead-based assay established here in different equine samples of healthy adult individuals. In serum the median total IgA was 0.45 mg/ml for Thoroughbred horses (TB, n = 10) and 1.16 mg/ml in Icelandic horses (ICH, n = 12). In nasopharyngeal secretions of TB (n = 7) 0.13 mg/ml median total IgA was measured, and 0.25 mg/ml for ICH (n = 12). Saliva of ICH (n = 6) contained a median of 0.15 mg/ml, colostrum of Warmbloods (n = 8) a median of 1.89 mg/ml IgA. Compared to IgG1 and IgG4/7 quantified in the same samples, IgA appeared as the major immunoglobulin isotype in nasopharyngeal secretions and saliva while it is a minor isotype in serum and colostrum. The newly developed monoclonal antibodies against equine IgA and the resulting bead-based assay for quantification of total IgA can notably improve the evaluation of mucosal immunity in horses. |
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0165-2427 |
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Equine Behaviour @ team @ |
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6152 |
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Author |
Schino, G.; Aureli, F. |
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Title |
Reciprocity in group-living animals: partner control versus partner choice |
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Journal Article |
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Year |
2016 |
Publication |
Biological Reviews |
Abbreviated Journal |
Biol Rev |
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92 |
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2 |
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665-672 |
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Keywords |
cooperation; reciprocity; partner control; partner choice; proximate mechanisms |
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ABSTRACT Reciprocity is probably the most debated of the evolutionary explanations for cooperation. Part of the confusion surrounding this debate stems from a failure to note that two different processes can result in reciprocity: partner control and partner choice. We suggest that the common observation that group-living animals direct their cooperative behaviours preferentially to those individuals from which they receive most cooperation is to be interpreted as the result of the sum of the two separate processes of partner control and partner choice. We review evidence that partner choice is the prevalent process in primates and propose explanations for this pattern. We make predictions that highlight the need for studies that separate the effects of partner control and partner choice in a broader variety of group-living taxa. |
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Wiley/Blackwell (10.1111) |
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1464-7931 |
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doi: 10.1111/brv.12248 |
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Equine Behaviour @ team @ |
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6411 |
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Author |
König v. Borstel, U.; Visser, E.K.; Hall, C. |
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Title |
Indicators of stress in equitation |
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Journal Article |
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Year |
2017 |
Publication |
Applied Animal Behaviour Science |
Abbreviated Journal |
Appl. Anim. Behav. Sci. |
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190 |
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43-56 |
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Stress; Horse; Riding; Heart rate variability; Cortisol; Behaviour |
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Abstract Stress is a generic concept describing the body's reaction to external stimuli, including both physiological and psychological factors. Therefore, by definition, the assessment of psychological stress in the exercising horse encompasses the problem of teasing apart the psychological and physiological factors both of which result in stress responses. The present study reviews the existing literature on various measures of stress taken specifically in the context of equitation science. Particular attention has been paid to short-term effects, and commonly used measurements of short-term stress include heart rate, a number of heart rate variability parameters, blood or saliva cortisol levels, eye temperature, and various behaviour parameters including in particular behaviour patterns presumably indicative of conflict with the rider's/trainer's aids. Inspection of the individual studies' results revealed that disagreement between these different measures of stress is commonplace. For physiological parameters, the largest proportion of agreement (i.e. both parameters simultaneously indicated either higher, insignificant or lower stress compared to a control treatment) was found for heart rate and heart rate variability parameters, while generally limited agreement was found for cortisol. It appears that cortisol levels may not be particularly useful for assessing/assessment of the valence of a situation in the exercising horse as cortisol levels are predominantly linked to activation and exercise levels. Although heart rate variability parameters reflect in theory more closely sympathovagal balance compared to cortisol levels, great care has to be taken regarding the use of appropriate time-frames, appropriate raw data correction methods as well as the use of appropriate equipment. In spite of its wide-spread and apparently successful use, popular equipment may in fact not be accurate enough under field conditions. Eye temperature is another promising parameter for assessment of psychological stress, but the technique is likewise susceptible to application errors. Given the high susceptibility of physiological parameters to errors at various experimental stages, behavioural rather than physiological parameters may in fact provide more accurate measures of valence when conducting experiments in the exercising horse. Behavioural parameters that appear to be particularly practical in assessing stress in ridden horses' behaviour are associated with frequencies of behaviour indicative of conflict. However, while increased frequencies of are a good indicator of stress, the absence of conflict behaviour does not provide proof of the absence of stress due to the possible occurrence of conditions such as Learned Helplessness. In future studies, the above issues should be taken into consideration when designing experiments to assess psychological stress in ridden horses. |
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0168-1591 |
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Equine Behaviour @ team @ |
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6160 |
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Author |
Briard, L.; Deneubourg, J.-L.; Petit, O. |
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Title |
How stallions influence the dynamic of collective movements in two groups of domestic horses, from departure to arrival |
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Journal Article |
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Year |
2017 |
Publication |
Behavioural Processes |
Abbreviated Journal |
Behav. Process. |
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142 |
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56-63 |
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consensus; herding; polygyny; personal leadership; shared decision |
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Abstract The role of leader in polygynous species has been solely attributed to the male for some time, but recent studies shown decision making to be distributed within the group. However, the specific reproductive strategy and behavioural repertoire of males in polygynous species such as horses may mean that these individuals still have the potential to play a specific role during decision-making. To investigate this subject, we thoroughly studied the behaviour of two domestic stallions during collective movements of their group. We found that they initiated rarely and sometimes failed to recruit the entire group. When departing as followers, they did not accelerate the joining process. Both stallions preferentially occupied the rear position and exhibited numerous monitoring behaviours. Herding behaviours were performed by only one stallion and mostly occurred outside movement context. Finally, we removed this herding stallion from its group to evaluate how the group dynamic changed. As a result, half of the collective movements were five times slower and mares were more dispersed in comparison when the stallion was in the group. Overall, our results suggest that, the two stallions maintained their role of group monitors from departure to arrival. Their influence on the movement dynamic was indirect and did not play a specific role in the process of decision making. |
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0376-6357 |
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Equine Behaviour @ team @ |
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6151 |
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Author |
Sueur, C.; Jacobs, A.; Amblard, F.; Petit, O.; King, A.J. |
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Title |
How can social network analysis improve the study of primate behavior? |
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Journal Article |
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2010 |
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American Journal of Primatology |
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Am. J. Primatol. |
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73 |
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8 |
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703-719 |
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interaction; association; social system; social structure; methodology; behavioral sampling |
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Abstract When living in a group, individuals have to make trade-offs, and compromise, in order to balance the advantages and disadvantages of group life. Strategies that enable individuals to achieve this typically affect inter-individual interactions resulting in nonrandom associations. Studying the patterns of this assortativity using social network analyses can allow us to explore how individual behavior influences what happens at the group, or population level. Understanding the consequences of these interactions at multiple scales may allow us to better understand the fitness implications for individuals. Social network analyses offer the tools to achieve this. This special issue aims to highlight the benefits of social network analysis for the study of primate behaviour, assessing it's suitability for analyzing individual social characteristics as well as group/population patterns. In this introduction to the special issue, we first introduce social network theory, then demonstrate with examples how social networks can influence individual and collective behaviors, and finally conclude with some outstanding questions for future primatological research. Am. J. Primatol. 73:703?719, 2011. ? 2011 Wiley-Liss, Inc. |
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Wiley-Blackwell |
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0275-2565 |
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doi: 10.1002/ajp.20915 |
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Equine Behaviour @ team @ |
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6410 |
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Author |
Reinhardt, I.; Kluth, G.; Nowak, C.; Szentiks, C.A.; Krone, O.; Ansorge, H.; Mueller, T. |
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Title |
Military training areas facilitate the recolonization of wolves in Germany |
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Journal Article |
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Year |
2019 |
Publication |
Conservation Letters |
Abbreviated Journal |
Conservation Letters |
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12 |
Issue |
3 |
Pages |
e12635 |
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Keywords |
Canis lupus; large carnivores; population growth; protected areas; recolonization |
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Abstract Wolves (Canis lupus) are currently showing a remarkable comeback in the highly fragmented cultural landscapes of Germany. We here show that wolf numbers increased exponentially between 2000 and 2015 with an annual increase of about 36%. We demonstrate that the first territories in each newly colonized region were established over long distances from the nearest known reproducing pack on active military training areas (MTAs). We show that MTAs, rather than protected areas, served as stepping-stones for the recolonization of Germany facilitating subsequent spreading of wolf territories in the surrounding landscape. We did not find any significant difference between MTAs and protected areas with regard to habitat. One possible reason for the importance of MTAs may be their lower anthropogenic mortality rates compared to protected and other areas. To our knowledge, this is the first documented case where MTAs facilitate the recolonization of an endangered species across large areas. |
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John Wiley & Sons, Ltd |
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1755-263x |
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https://doi.org/10.1111/conl.12635 |
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Equine Behaviour @ team @ |
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6676 |
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Author |
Galef, B.G.; Laland, K.N. |
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Title |
Social Learning in Animals: Empirical Studies and Theoretical Models |
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Journal Article |
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2005 |
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BioScience |
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55 |
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6 |
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489-499 |
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AbstractThe last two decades have seen a virtual explosion in empirical research on the role of social interactions in the development of animals' behavioral repertoires, and a similar increase in attention to formal models of social learning. Here we first review recent empirical evidence of social influences on food choice, tool use, patterns of movement, predator avoidance, mate choice, and courtship, and then consider formal models of when animals choose to copy behavior, and which other animals' behavior they copy, together with empirical tests of predictions from those models. |
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0006-3568 |
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10.1641/0006-3568(2005)055[0489:Sliaes]2.0.Co;2 |
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Equine Behaviour @ team @ |
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6398 |
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Burke, C.; Rashman, M.; Wich, S.; Symons, A.; Theron, C.; Longmore, S. |
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Title |
Optimizing observing strategies for monitoring animals using drone-mounted thermal infrared cameras |
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Journal Article |
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2019 |
Publication |
International Journal of Remote Sensing |
Abbreviated Journal |
International Journal of Remote Sensing |
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40 |
Issue |
2 |
Pages |
439-467 |
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ABSTRACTThe proliferation of relatively affordable off-the-shelf drones offers great opportunities for wildlife monitoring and conservation. Similarly the recent reduction in the cost of thermal infrared cameras also offers new promise in this field, as they have the advantage over conventional RGB cameras of being able to distinguish animals based on their body heat and being able to detect animals at night. However, the use of drone-mounted thermal infrared cameras comes with several technical challenges. In this article, we address some of these issues, namely thermal contrast problems due to heat from the ground, absorption and emission of thermal infrared radiation by the atmosphere, obscuration by vegetation, and optimizing the flying height of drones for a best balance between covering a large area and being able to accurately image and identify animals of interest. We demonstrate the application of these methods with a case study using field data and make the first ever detection of the critically endangered riverine rabbit (Bunolagus monticularis) in thermal infrared data. We provide a web-tool so that the community can easily apply these techniques to other studies (http://www.astro.ljmu.ac.uk/aricburk/uav_calc/). |
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Taylor & Francis |
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0143-1161 |
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doi: 10.1080/01431161.2018.1558372 |
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Equine Behaviour @ team @ |
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6528 |
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Author |
A. Lanata; A. Guidi; G. Valenza; P. Baragli; E. P. Scilingo |
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Title |
Quantitative heartbeat coupling measures in human-horse interaction |
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Conference Article |
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Year |
2016 |
Publication |
2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (EMBC) |
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2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (E |
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2696-2699 |
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Keywords |
electrocardiography; medical signal processing; signal classification; time series; Dtw; Hrv; Mpc; Msc; complex biological systems; dynamic time warping; grooming; heart rate variability time series; heartbeat dynamics; human-horse dynamic interaction; magnitude squared coherence; magnitude-phase coupling; mean phase coherence; nearest mean classifier; quantitative heartbeat coupling; real human-animal interaction; time duration; visual-olfactory interaction; Coherence; Couplings; Electrocardiography; Heart rate variability; Horses; Protocols; Time series analysis |
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Abstract— We present a study focused on a quantitative estimation of a human-horse dynamic interaction. A set of measures based on magnitude and phase coupling between heartbeat dynamics of both humans and horses in three different conditions is reported: no interaction, visual/olfactory interaction and grooming. Specifically, Magnitude Squared Coherence (MSC), Mean Phase Coherence (MPC) and Dynamic Time Warping (DTW) have been used as estimators of the amount of coupling between human and horse through the analysis of their heart rate variability (HRV) time series in a group of eleven human subjects, and one horse. The rationale behind this study is that the interaction of two complex biological systems go towards a coupling process whose dynamical evolution is modulated by the kind and time duration of the interaction itself. We achieved a congruent and consistent
statistical significant difference for all of the three indices. Moreover, a Nearest Mean Classifier was able to recognize the three classes of interaction with an accuracy greater than 70%. Although preliminary, these encouraging results allow a discrimination of three distinct phases in a real human-animal interaction opening to the characterization of the empirically proven relationship between human and horse. |
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2016 38th Annual International Conference of the IEEE Engineering in Medicine and Biology Society (E |
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1557-170x |
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Equine Behaviour @ team @ |
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6175 |
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